RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TTC6Q86TZ1 520 aa19.54■□□□□ 0.72
LIM2-202ENST00000596399 DNAJC2Q99543 621 aaKnown RBP19.54■□□□□ 0.72
LIM2-202ENST00000596399 DDX60LQ5H9U9 1706 aaKnown RBP19.54■□□□□ 0.72
LIM2-202ENST00000596399 ZNF532Q9HCE3 1301 aa19.53■□□□□ 0.72
LIM2-202ENST00000596399 POLR3DP05423 398 aaPredicted RBP19.53■□□□□ 0.72
LIM2-202ENST00000596399 CYP2D6P10635 497 aa19.53■□□□□ 0.72
LIM2-202ENST00000596399 MAPK4P31152 587 aa19.53■□□□□ 0.72
LIM2-202ENST00000596399 CACNB2Q08289 660 aaPredicted RBP19.53■□□□□ 0.72
LIM2-202ENST00000596399 MORN1Q5T089 497 aa19.53■□□□□ 0.72
LIM2-202ENST00000596399 CCAR1Q8IX12 1150 aaKnown RBP19.53■□□□□ 0.72
LIM2-202ENST00000596399 C7orf61Q8IZ16 206 aa19.53■□□□□ 0.72
LIM2-202ENST00000596399 SDR42E1Q8WUS8 393 aa19.53■□□□□ 0.72
LIM2-202ENST00000596399 C12orf42Q96LP6 360 aa19.53■□□□□ 0.72
LIM2-202ENST00000596399 TCRBV5S4A2TA0A5A2 114 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L15C9J2P7 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L13C9JLJ4 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L11C9JVI0 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L18D6R9N7 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L22D6RA61 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L17D6RBQ6 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L19D6RCP7 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L20D6RJB6 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 CHGBP05060 677 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 XRCC5P13010 732 aaKnown RBP19.52■□□□□ 0.72
LIM2-202ENST00000596399 VCAM1P19320 739 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 USP17L24Q0WX57 530 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 SEPT2Q15019 361 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 CATSPERGQ6ZRH7 1159 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 PLEKHH3Q7Z736 793 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 CERS3Q8IU89 383 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 LCORLQ8N3X6 602 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 SOCS4Q8WXH5 440 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 BTBD7Q9P203 1132 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 ZMYND8Q9ULU4 1186 aaPredicted RBP19.52■□□□□ 0.72
LIM2-202ENST00000596399 LAMA3Q16787 3333 aa19.52■□□□□ 0.72
LIM2-202ENST00000596399 SMIM22K7EJ46 135 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 ZKSCAN1P17029 563 aaPredicted RBP19.51■□□□□ 0.71
LIM2-202ENST00000596399 CCND3P30281 292 aaPredicted RBP19.51■□□□□ 0.71
LIM2-202ENST00000596399 GABPAQ06546 454 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 HSP90AB4PQ58FF6 505 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 CLASRPQ8N2M8 674 aaKnown RBP19.51■□□□□ 0.71
LIM2-202ENST00000596399 ANKLE1Q8NAG6 615 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 SLC44A5Q8NCS7 719 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 NBPF3Q9H094 633 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 KIAA1683Q9H0B3 1180 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 ZBTB40Q9NUA8 1239 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 MCM9Q9NXL9 1143 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 OGDHLQ9ULD0 1010 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 NAV1Q8NEY1 1877 aa19.51■□□□□ 0.71
LIM2-202ENST00000596399 A0A1W2PRG0 241 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 SOX1O00570 391 aaPredicted RBP19.5■□□□□ 0.71
LIM2-202ENST00000596399 PRKAB2O43741 272 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 IFIT2P09913 472 aaKnown RBP19.5■□□□□ 0.71
LIM2-202ENST00000596399 RGS2P41220 211 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
LIM2-202ENST00000596399 WDR78Q5VTH9 848 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 KIF1BPQ96EK5 621 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 C11orf49Q9H6J7 331 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 RPAP3Q9H6T3 665 aaPredicted RBP19.5■□□□□ 0.71
LIM2-202ENST00000596399 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 CABP5Q9NP86 173 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 FLRT1Q9NZU1 646 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 RABGAP1Q9Y3P9 1069 aa19.5■□□□□ 0.71
LIM2-202ENST00000596399 MPHOSPH10O00566 681 aaKnown RBP19.49■□□□□ 0.71
LIM2-202ENST00000596399 SYN1P17600 705 aa19.49■□□□□ 0.71
LIM2-202ENST00000596399 CAPN2P17655 700 aa19.49■□□□□ 0.71
LIM2-202ENST00000596399 USP14P54578 494 aa19.49■□□□□ 0.71
LIM2-202ENST00000596399 LHX8Q68G74 356 aa19.49■□□□□ 0.71
LIM2-202ENST00000596399 RPAP2Q8IXW5 612 aaPredicted RBP19.49■□□□□ 0.71
LIM2-202ENST00000596399 GTF3C2Q8WUA4 911 aaPredicted RBP19.49■□□□□ 0.71
LIM2-202ENST00000596399 DYNLL2Q96FJ2 89 aa19.49■□□□□ 0.71
LIM2-202ENST00000596399 CRNKL1Q9BZJ0 848 aaKnown RBP19.49■□□□□ 0.71
LIM2-202ENST00000596399 BOLA2Q9H3K6 86 aa19.49■□□□□ 0.71
LIM2-202ENST00000596399 CWC22Q9HCG8 908 aaKnown RBP19.49■□□□□ 0.71
LIM2-202ENST00000596399 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
LIM2-202ENST00000596399 PFASO15067 1338 aa19.49■□□□□ 0.71
LIM2-202ENST00000596399 SPDYE16A6NNV3 312 aaPredicted RBP19.48■□□□□ 0.71
LIM2-202ENST00000596399 MAP2K5Q13163 448 aa19.48■□□□□ 0.71
LIM2-202ENST00000596399 KIAA1755Q5JYT7 1200 aa19.48■□□□□ 0.71
LIM2-202ENST00000596399 CLEC10AQ8IUN9 316 aa19.48■□□□□ 0.71
LIM2-202ENST00000596399 LRCH3Q96II8 777 aa19.48■□□□□ 0.71
LIM2-202ENST00000596399 APBA2Q99767 749 aa19.48■□□□□ 0.71
LIM2-202ENST00000596399 C20orf194Q5TEA3 1177 aa19.47■□□□□ 0.71
LIM2-202ENST00000596399 TMED8Q6PL24 325 aaPredicted RBP19.47■□□□□ 0.71
LIM2-202ENST00000596399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.47■□□□□ 0.71
LIM2-202ENST00000596399 DNAH12Q6ZR08 3092 aa19.46■□□□□ 0.71
LIM2-202ENST00000596399 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
LIM2-202ENST00000596399 MBD4O95243 580 aa19.46■□□□□ 0.71
LIM2-202ENST00000596399 TRMT44Q8IYL2 757 aaKnown RBP19.46■□□□□ 0.71
LIM2-202ENST00000596399 NPLOC4Q8TAT6 608 aa19.46■□□□□ 0.71
LIM2-202ENST00000596399 PAG1Q9NWQ8 432 aa19.46■□□□□ 0.71
LIM2-202ENST00000596399 DDX19BQ9UMR2 479 aa19.46■□□□□ 0.71
LIM2-202ENST00000596399 SMARCA5O60264 1052 aaPredicted RBP19.45■□□□□ 0.7
LIM2-202ENST00000596399 HMMRO75330 724 aa19.45■□□□□ 0.7
LIM2-202ENST00000596399 MS4A1P11836 297 aa19.45■□□□□ 0.7
LIM2-202ENST00000596399 PTPREP23469 700 aa19.45■□□□□ 0.7
LIM2-202ENST00000596399 CCNA1P78396 465 aa19.45■□□□□ 0.7
LIM2-202ENST00000596399 LBX2Q6XYB7 198 aa19.45■□□□□ 0.7
LIM2-202ENST00000596399 SIAH1Q8IUQ4 282 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms