RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 ATP8B2P98198 1209 aa11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 G3BP1Q13283 466 aaKnown RBP eCLIP11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 NAA16Q6N069 864 aaPredicted RBP11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 FOXP4Q8IVH2 680 aaPredicted RBP11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 PAGR1Q9BTK6 254 aa11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 FLRT1Q9NZU1 646 aa11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 DBNLQ9UJU6 430 aaKnown RBP11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 NOP58Q9Y2X3 529 aaKnown RBP11.94□□□□□ -0.5
NOTCH3-202ENST00000595045 DNM1LO00429 736 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 ASNSP08243 561 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 RLBP1P12271 317 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 FOSL2P15408 326 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 SMAD3P84022 425 aaKnown RBP11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 MAP2K5Q13163 448 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 LPAR1Q92633 364 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 EAF2Q96CJ1 260 aaPredicted RBP11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
NOTCH3-202ENST00000595045 CHD7Q9P2D1 2997 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 USP17L10C9JJH3 530 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 EVX2Q03828 476 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 GTF3C2Q8WUA4 911 aaPredicted RBP11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 EDC3Q96F86 508 aaKnown RBP11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 ANTXR1Q9H6X2 564 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 SAP30BPQ9UHR5 308 aaKnown RBP11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 ATP11BQ9Y2G3 1177 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
NOTCH3-202ENST00000595045 REV3LO60673 3130 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 CCER2I3L3R5 266 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 MSCO60682 206 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 BAG3O95817 575 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 CNGA1P29973 690 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 TRPV1Q8NER1 839 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 ACER1Q8TDN7 264 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 FRAT1Q92837 279 aaPredicted RBP11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 BADQ92934 168 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 C12orf42Q96LP6 360 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 C1orf115Q9H7X2 142 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 GINM1Q9NU53 330 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 RAPGEFL1Q9UHV5 662 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 CDK5RAP2Q96SN8 1893 aa11.91□□□□□ -0.5
NOTCH3-202ENST00000595045 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 GH2P01242 217 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 PLCG2P16885 1265 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 CYP2C19P33261 490 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 TJAP1Q5JTD0 557 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 TTC39AQ5SRH9 613 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 GJC2Q5T442 439 aaPredicted RBP11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 SLC39A5Q6ZMH5 540 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 USP38Q8NB14 1042 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 CCDC8Q9H0W5 538 aaPredicted RBP11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 RABGAP1Q9Y3P9 1069 aa11.9□□□□□ -0.5
NOTCH3-202ENST00000595045 XIRP2A4UGR9 3374 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 SLC15A5A6NIM6 579 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 IGSF3O75054 1194 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 SURF6O75683 361 aaKnown RBP11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 GLRX3O76003 335 aaKnown RBP11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 HOXC6P09630 235 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 CYP7A1P22680 504 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 PTPREP23469 700 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 SHMT1P34896 483 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 PLCD1P51178 756 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 ATP2B2Q01814 1243 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 GABPAQ06546 454 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 TRIM60Q495X7 471 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 CATSPERGQ6ZRH7 1159 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 SH3RF1Q7Z6J0 888 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 NPLOC4Q8TAT6 608 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 RIOK1Q9BRS2 568 aaKnown RBP11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 PDLIM7Q9NR12 457 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 BTBD7Q9P203 1132 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
NOTCH3-202ENST00000595045 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 TMEM265A0A087WTH1 108 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 A0A1W2PRG0 241 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 TRIM43BA6NCK2 446 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 CYBAP13498 195 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 CCNA1P78396 465 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 GRB14Q14449 540 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 SNX17Q15036 470 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 LBX2Q6XYB7 198 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 ARRDC4Q8NCT1 418 aa11.88□□□□□ -0.51
NOTCH3-202ENST00000595045 TRIM43Q96BQ3 446 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms