RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 MKNK2Q9HBH9 465 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 SLC45A1Q9Y2W3 748 aa13.31□□□□□ -0.28
XRCC1-204ENST00000594511 IGF2BP3O00425 579 aaKnown RBP eCLIP13.3□□□□□ -0.28
XRCC1-204ENST00000594511 NOM1Q5C9Z4 860 aaKnown RBP13.3□□□□□ -0.28
XRCC1-204ENST00000594511 KIAA1211Q6ZU35 1233 aa13.3□□□□□ -0.28
XRCC1-204ENST00000594511 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
XRCC1-204ENST00000594511 FASTKD5Q7L8L6 764 aaKnown RBP13.3□□□□□ -0.28
XRCC1-204ENST00000594511 ANKRD23Q86SG2 305 aa13.3□□□□□ -0.28
XRCC1-204ENST00000594511 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
XRCC1-204ENST00000594511 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
XRCC1-204ENST00000594511 PROCA1Q8NCQ7 364 aaPredicted RBP13.3□□□□□ -0.28
XRCC1-204ENST00000594511 SAGE1Q9NXZ1 904 aa13.3□□□□□ -0.28
XRCC1-204ENST00000594511 TMX2Q9Y320 296 aa13.3□□□□□ -0.28
XRCC1-204ENST00000594511 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
XRCC1-204ENST00000594511 LOC285556D6RIA3 1793 aa13.3□□□□□ -0.28
XRCC1-204ENST00000594511 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 USP17L10C9JJH3 530 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 CA12O43570 354 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 ALDH1A1P00352 501 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 MFSD6Q6ZSS7 791 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 NKX2-3Q8TAU0 364 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 ACER1Q8TDN7 264 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 ANKS1AQ92625 1134 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 MTMR4Q9NYA4 1195 aa13.29□□□□□ -0.28
XRCC1-204ENST00000594511 CCL15-CCL14A0A0B4J2E2 113 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 BTBD19C9JJ37 291 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 PRDM1O75626 825 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
XRCC1-204ENST00000594511 HAND2P61296 217 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 TFAP4Q01664 338 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
XRCC1-204ENST00000594511 CCL15Q16663 113 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 RNF186Q9NXI6 227 aa13.28□□□□□ -0.28
XRCC1-204ENST00000594511 TRIM75PA6NK02 468 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 REC8O95072 547 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
XRCC1-204ENST00000594511 USP14P54578 494 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 ICA1Q05084 483 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 GRM1Q13255 1194 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 USP17L2Q6R6M4 530 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 FAM43AQ8N2R8 423 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 TTC14Q96N46 770 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 USP26Q9BXU7 913 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 CNNM2Q9H8M5 875 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 AGTPBP1Q9UPW5 1226 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 TAF6LQ9Y6J9 622 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 NEDD4P46934 1319 aa13.27□□□□□ -0.29
XRCC1-204ENST00000594511 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
XRCC1-204ENST00000594511 SLC27A2O14975 620 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 TSPY3P0CV98 308 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 TSPY8P0CW00 308 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 MTMR2Q13614 643 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 FAM47AQ5JRC9 791 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 CREB3L3Q68CJ9 461 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 OTUD7BQ6GQQ9 843 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 RCSD1Q6JBY9 416 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 STOX1Q6ZVD7 989 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 ESR2Q92731 530 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 ADGRA2Q96PE1 1338 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 MTA3Q9BTC8 594 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 KRT23Q9C075 422 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 ARHGEF10LQ9HCE6 1279 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 ZSWIM5Q9P217 1185 aa13.26□□□□□ -0.29
XRCC1-204ENST00000594511 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 E7EWF7 191 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
XRCC1-204ENST00000594511 TTLL1O95922 423 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 HSPA4P34932 840 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 HMGCS2P54868 508 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 CCDC178Q5BJE1 867 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 KIAA1755Q5JYT7 1200 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 DGKHQ86XP1 1220 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 CLEC10AQ8IUN9 316 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 LPAR1Q92633 364 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 SH2D4AQ9H788 454 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
XRCC1-204ENST00000594511 PCNTO95613 3336 aa13.24□□□□□ -0.29
XRCC1-204ENST00000594511 RLFQ13129 1914 aa13.24□□□□□ -0.29
XRCC1-204ENST00000594511 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
XRCC1-204ENST00000594511 RANBP6O60518 1105 aaKnown RBP13.24□□□□□ -0.29
XRCC1-204ENST00000594511 TREML2Q5T2D2 321 aa13.24□□□□□ -0.29
XRCC1-204ENST00000594511 MB21D2Q8IYB1 491 aaPredicted RBP13.24□□□□□ -0.29
XRCC1-204ENST00000594511 GMCL1P1Q8NEA9 526 aa13.24□□□□□ -0.29
XRCC1-204ENST00000594511 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
XRCC1-204ENST00000594511 B4E1Z4 1266 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 PDHXO00330 501 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 KDM4AO75164 1064 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 TRPA1O75762 1119 aa13.23□□□□□ -0.29
XRCC1-204ENST00000594511 HSPA1AP0DMV8 641 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms