RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 APOBRQ0VD83 1088 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 NFIAQ12857 509 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 PICALMQ13492 652 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 PRKG1Q13976 671 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 C16orf86Q6ZW13 317 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 SGMS1Q86VZ5 419 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 TMTC2Q8N394 836 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
VMP1-217ENST00000593168 DHX36Q9H2U1 1008 aaKnown RBP15.8■□□□□ 0.12
VMP1-217ENST00000593168 TDRD3Q9H7E2 651 aaKnown RBP15.8■□□□□ 0.12
VMP1-217ENST00000593168 GPHNQ9NQX3 736 aaPredicted RBP15.8■□□□□ 0.12
VMP1-217ENST00000593168 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 TMOD2Q9NZR1 351 aa15.8■□□□□ 0.12
VMP1-217ENST00000593168 ERICH2A1L162 156 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 FKTNO75072 461 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 PRDM1O75626 825 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 PDIA3P30101 505 aaKnown RBP15.79■□□□□ 0.12
VMP1-217ENST00000593168 NF2P35240 595 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 SREBF2Q12772 1141 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 TMEM67Q5HYA8 995 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 FKBP1CQ5VVH2 108 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 IQCA1Q86XH1 822 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 GTF3C6Q969F1 213 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 UBAC1Q9BSL1 405 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 MKNK2Q9HBH9 465 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 FAM198AQ9UFP1 575 aa15.79■□□□□ 0.12
VMP1-217ENST00000593168 HLA-DOAP06340 250 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 CDK8P49336 464 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 GABPAQ06546 454 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 ST3GAL1Q11201 340 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 ZNF444Q8N0Y2 327 aaPredicted RBP15.78■□□□□ 0.12
VMP1-217ENST00000593168 NECAB1Q8N987 351 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 EHD4Q9H223 541 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 LY9Q9HBG7 655 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 ZNF70Q9UC06 446 aaPredicted RBP15.78■□□□□ 0.12
VMP1-217ENST00000593168 SWAP70Q9UH65 585 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 BRPF3Q9ULD4 1205 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 FZD1Q9UP38 647 aa15.78■□□□□ 0.12
VMP1-217ENST00000593168 KLF18A0A0U1RQI7 1052 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 MYO1BO43795 1136 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 WTAPQ15007 396 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 SEC23AQ15436 765 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 SLC4A8Q2Y0W8 1093 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 CCDC178Q5BJE1 867 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 LDLRAD1Q5T700 205 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 SPRYD7Q5W111 196 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 ARMC9Q7Z3E5 817 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.12
VMP1-217ENST00000593168 ZSCAN10Q96SZ4 725 aaPredicted RBP15.77■□□□□ 0.12
VMP1-217ENST00000593168 LLPHQ9BRT6 129 aaKnown RBP15.77■□□□□ 0.12
VMP1-217ENST00000593168 TCP11L1Q9NUJ3 509 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 PI4KBQ9UBF8 816 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 SERPINB13Q9UIV8 391 aa15.77■□□□□ 0.12
VMP1-217ENST00000593168 COL2A1P02458 1487 aaPredicted RBP15.77■□□□□ 0.11
VMP1-217ENST00000593168 ATRNL1Q5VV63 1379 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 TNKSO95271 1327 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 HTTP42858 3142 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 TSPY2A6NKD2 308 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 RASA1P20936 1047 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 RCAN1P53805 252 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 CACNB3P54284 484 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 NUCB2P80303 420 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 TFAP4Q01664 338 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 SCRN1Q12765 414 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 STK3Q13188 491 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 APOBEC3FQ8IUX4 373 aaKnown RBP15.76■□□□□ 0.11
VMP1-217ENST00000593168 ZFPM1Q8IX07 1006 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 ANKS1AQ92625 1134 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 ZKSCAN3Q9BRR0 538 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 SMC3Q9UQE7 1217 aa15.76■□□□□ 0.11
VMP1-217ENST00000593168 RBBP6Q7Z6E9 1792 aaKnown RBP15.76■□□□□ 0.11
VMP1-217ENST00000593168 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 CCDC69A6NI79 296 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 DHX16O60231 1041 aaKnown RBP15.75■□□□□ 0.11
VMP1-217ENST00000593168 TCP10Q12799 353 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 FAM47AQ5JRC9 791 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 APOA5Q6Q788 366 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 SYNE3Q6ZMZ3 975 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 NFXL1Q6ZNB6 911 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 FAM83AQ86UY5 434 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 METTL16Q86W50 562 aaKnown RBP15.75■□□□□ 0.11
VMP1-217ENST00000593168 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 NEDD1Q8NHV4 660 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 FAM151AQ8WW52 585 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 SENP2Q9HC62 589 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 SLC12A7Q9Y666 1083 aa15.75■□□□□ 0.11
VMP1-217ENST00000593168 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
VMP1-217ENST00000593168 GOLGA8BA8MQT2 603 aa15.74■□□□□ 0.11
VMP1-217ENST00000593168 ZBTB43O43298 467 aa15.74■□□□□ 0.11
VMP1-217ENST00000593168 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
VMP1-217ENST00000593168 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
VMP1-217ENST00000593168 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
VMP1-217ENST00000593168 CCT2P78371 535 aaKnown RBP15.74■□□□□ 0.11
VMP1-217ENST00000593168 SH3BP5LQ7L8J4 393 aa15.74■□□□□ 0.11
VMP1-217ENST00000593168 DGKHQ86XP1 1220 aa15.74■□□□□ 0.11
VMP1-217ENST00000593168 ENAHQ8N8S7 591 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms