RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 ATP1A2P50993 1020 aa16.08■□□□□ 0.17
CIRBP-242ENST00000593093 FOXO4P98177 505 aa16.08■□□□□ 0.17
CIRBP-242ENST00000593093 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.172e-10■■■□□ 15.8
CIRBP-242ENST00000593093 KCTD16Q68DU8 428 aa16.08■□□□□ 0.17
CIRBP-242ENST00000593093 SND1Q7KZF4 910 aaKnown RBP eCLIP16.08■□□□□ 0.17
CIRBP-242ENST00000593093 PLBD2Q8NHP8 589 aa16.08■□□□□ 0.17
CIRBP-242ENST00000593093 BCAS4Q8TDM0 211 aa16.08■□□□□ 0.17
CIRBP-242ENST00000593093 MAP3K14Q99558 947 aa16.08■□□□□ 0.17
CIRBP-242ENST00000593093 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 EBAG9O00559 213 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 SPATA1Q5VX52 437 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 MED15Q96RN5 788 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 GOLGA6AQ9NYA3 693 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 TTF2Q9UNY4 1162 aaKnown RBP16.08■□□□□ 0.16
CIRBP-242ENST00000593093 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 ZFYP08048 801 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-242ENST00000593093 RNF187Q5TA31 235 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-242ENST00000593093 FBXW10Q5XX13 1052 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 FAM76AQ8TAV0 307 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 MMS19Q96T76 1030 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 UBXN6Q9BZV1 441 aa16.08■□□□□ 0.16
CIRBP-242ENST00000593093 SH2B2O14492 632 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-242ENST00000593093 SLC7A5Q01650 507 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 CYP27A1Q02318 531 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 WTAPQ15007 396 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 SYMPKQ92797 1274 aaKnown RBP16.07■□□□□ 0.16
CIRBP-242ENST00000593093 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-242ENST00000593093 GYPCP04921 128 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 ENOX2Q16206 610 aaKnown RBP16.07■□□□□ 0.16
CIRBP-242ENST00000593093 MAP9Q49MG5 647 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 MKRN1Q9UHC7 482 aaKnown RBP16.07■□□□□ 0.16
CIRBP-242ENST00000593093 ANKARQ7Z5J8 1434 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 PXDNQ92626 1479 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 PRKAB2O43741 272 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 ERLIN2O94905 339 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 MBD4O95243 580 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 CXCR5P32302 372 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 TOB1P50616 345 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-242ENST00000593093 RNASE9P60153 205 aaKnown RBP16.07■□□□□ 0.16
CIRBP-242ENST00000593093 C2orf54Q08AI8 447 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 CCDC70Q6NSX1 233 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
CIRBP-242ENST00000593093 ERVK-24P63145 666 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 PPARAQ07869 468 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 MORC3Q14149 939 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 RABL6Q3YEC7 729 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-242ENST00000593093 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-242ENST00000593093 PANX2Q96RD6 677 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 EPN1Q9Y6I3 576 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-242ENST00000593093 ATP2C2O75185 946 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 ATP1A1P05023 1023 aaKnown RBP16.06■□□□□ 0.16
CIRBP-242ENST00000593093 ZNF18P17022 549 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 CYP26C1Q6V0L0 522 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 TMTC1Q8IUR5 882 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 SAR1BQ9Y6B6 198 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 IDEP14735 1019 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 MCM7P33993 719 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 KRT31Q15323 416 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 RILPL1Q5EBL4 403 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 WASF1Q92558 559 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 ABCF2Q9UG63 623 aa16.06■□□□□ 0.16
CIRBP-242ENST00000593093 A0A1B0GTH6 734 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 GOLGA6BA6NDN3 693 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 TULP1O00294 542 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-242ENST00000593093 FOXP2O15409 715 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 TRIM21P19474 475 aaKnown RBP16.05■□□□□ 0.16
CIRBP-242ENST00000593093 PTPREP23469 700 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 GNGT1P63211 74 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 CTAGE1Q96RT6 745 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 PSD3Q9NYI0 1048 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 FBXO2Q9UK22 296 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-242ENST00000593093 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 KCTD19Q17RG1 926 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-242ENST00000593093 CCDC181Q5TID7 509 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 SMARCAL1Q9NZC9 954 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 FAM208AQ9UK61 1670 aaKnown RBP16.05■□□□□ 0.16
CIRBP-242ENST00000593093 LUC7L2Q9Y383 392 aaKnown RBP16.05■□□□□ 0.16
CIRBP-242ENST00000593093 V9GY48 417 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-242ENST00000593093 JCADQ9P266 1359 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 PPFIA4O75335 1185 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 MCAMP43121 646 aa16.05■□□□□ 0.16
CIRBP-242ENST00000593093 TRIM49BA6NDI0 452 aa16.04■□□□□ 0.16
CIRBP-242ENST00000593093 KAT14Q9H8E8 782 aa16.04■□□□□ 0.16
CIRBP-242ENST00000593093 ZNHIT6Q9NWK9 470 aaKnown RBP16.04■□□□□ 0.16
CIRBP-242ENST00000593093 ADD3Q9UEY8 706 aaKnown RBP16.04■□□□□ 0.16
CIRBP-242ENST00000593093 KIAA0754O94854 1291 aa16.04■□□□□ 0.16
CIRBP-242ENST00000593093 MMP1P03956 469 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms