RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L20D6RJB6 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 SMIM22K7EJ46 135 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 INHAP05111 366 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 GJB1P08034 283 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP14P54578 494 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L24Q0WX57 530 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 KBTBD3Q8NAB2 608 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 SHISA4Q96DD7 197 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 DDRGK1Q96HY6 314 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 CRBNQ96SW2 442 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 UNC93B1Q9H1C4 597 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 SWAP70Q9UH65 585 aa15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 RBBP6Q7Z6E9 1792 aaKnown RBP15.76■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L12C9JPN9 530 aa15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 USP17L21D6R901 530 aa15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 VCAM1P19320 739 aa15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 C12orf60Q5U649 245 aa15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 AMOTL1Q8IY63 956 aa15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 NKX2-3Q8TAU0 364 aa15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 GTF3C2Q8WUA4 911 aaPredicted RBP15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 GJD2Q9UKL4 321 aa15.75■□□□□ 0.11
PRKCSH-218ENST00000593053 NAV1Q8NEY1 1877 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 GJA8P48165 433 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 ERVK-9P63128 1117 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 ERVK-24P63145 666 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 Q3C1V9 767 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 CATSPERGQ6ZRH7 1159 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 TMEM179Q6ZVK1 233 aa15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 OTUD7AQ8TE49 926 aaPredicted RBP15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 STRBPQ96SI9 672 aaKnown RBP15.74■□□□□ 0.11
PRKCSH-218ENST00000593053 RNF113AO15541 343 aaKnown RBP15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 AKR1B1P15121 316 aa15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 MAPK4P31152 587 aa15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 CDK8P49336 464 aa15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 CTR9Q6PD62 1173 aa15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 CLEC10AQ8IUN9 316 aa15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 CCAR1Q8IX12 1150 aaKnown RBP15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 U2AF1L4Q8WU68 220 aaKnown RBP15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 OSBP2Q969R2 916 aa15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 PORCNQ9H237 461 aa15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
PRKCSH-218ENST00000593053 TTC41PQ6P2S7 1318 aa15.72■□□□□ 0.11
PRKCSH-218ENST00000593053 ERC2O15083 957 aa15.72■□□□□ 0.11
PRKCSH-218ENST00000593053 C16orf86Q6ZW13 317 aa15.72■□□□□ 0.11
PRKCSH-218ENST00000593053 APPBP2Q92624 585 aa15.72■□□□□ 0.11
PRKCSH-218ENST00000593053 RABGAP1Q9Y3P9 1069 aa15.72■□□□□ 0.11
PRKCSH-218ENST00000593053 MGAMO43451 1857 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 CNMDO75829 334 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 HMGCRP04035 888 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 ZFYP08048 801 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 CYP2B6P20813 491 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 ICA1Q05084 483 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 PI4K2BQ8TCG2 481 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 SOCS4Q8WXH5 440 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 CCDC17Q96LX7 622 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 DEFB118Q96PH6 123 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 NUDT12Q9BQG2 462 aa15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 CWC22Q9HCG8 908 aaKnown RBP15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 ARPP21Q9UBL0 812 aaPredicted RBP15.71■□□□□ 0.11
PRKCSH-218ENST00000593053 SPDYE16A6NNV3 312 aaPredicted RBP15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 GSG1L2A8MUP6 293 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 GPAA1O43292 621 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 GLRX3O76003 335 aaKnown RBP15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 SGPL1O95470 568 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 MX1P20591 662 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 TRIM32Q13049 653 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 KIAA1755Q5JYT7 1200 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 GPR142Q7Z601 462 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 PLEKHH3Q7Z736 793 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 SIAH1Q8IUQ4 282 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 TANGO6Q9C0B7 1094 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 ARHGEF10LQ9HCE6 1279 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 PAK6Q9NQU5 681 aaPredicted RBP15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 BTBD7Q9P203 1132 aa15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
PRKCSH-218ENST00000593053 M0R2C6 588 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 TFRCP02786 760 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 CCNA1P78396 465 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 LRRFIP1Q32MZ4 808 aaKnown RBP15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 ANKRD45Q5TZF3 282 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 WDR78Q5VTH9 848 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 GIMAP6Q6P9H5 292 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 UBE2Q1Q7Z7E8 422 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 SPICE1Q8N0Z3 855 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 STK11IPQ8N1F8 1099 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 TRIB2Q92519 343 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 FSD1Q9BTV5 496 aa15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.69■□□□□ 0.1
PRKCSH-218ENST00000593053 SH2D4AQ9H788 454 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms