RNA–Protein interactions for RNA: ENST00000592954.1

APOC4-202, Transcript of apolipoprotein C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC4, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-202ENST00000592954 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 GABPAQ06546 454 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 SEPT2Q15019 361 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 HABP4Q5JVS0 413 aaKnown RBP16.24■□□□□ 0.19
APOC4-202ENST00000592954 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 U2AF1L4Q8WU68 220 aaKnown RBP16.24■□□□□ 0.19
APOC4-202ENST00000592954 DYNLL2Q96FJ2 89 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 GPATCH3Q96I76 525 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 DCTPP1Q9H773 170 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 CWC22Q9HCG8 908 aaKnown RBP16.24■□□□□ 0.19
APOC4-202ENST00000592954 ATP8A2Q9NTI2 1148 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 RBPJLQ9UBG7 517 aa16.24■□□□□ 0.19
APOC4-202ENST00000592954 TFRCP02786 760 aaKnown RBP16.23■□□□□ 0.19
APOC4-202ENST00000592954 CYP2B6P20813 491 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 UBE3CQ15386 1083 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 Q3C1V9 767 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 SLC44A5Q8NCS7 719 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 DPF3Q92784 378 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 C12orf42Q96LP6 360 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 DEFB118Q96PH6 123 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 KIAA1683Q9H0B3 1180 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 GJD2Q9UKL4 321 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 SLC4A4Q9Y6R1 1079 aa16.23■□□□□ 0.19
APOC4-202ENST00000592954 SGPL1O95470 568 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 VCAM1P19320 739 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 ERVK-24P63145 666 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 GTF3C2Q8WUA4 911 aaPredicted RBP16.22■□□□□ 0.19
APOC4-202ENST00000592954 SWAP70Q9UH65 585 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 NAV1Q8NEY1 1877 aa16.22■□□□□ 0.19
APOC4-202ENST00000592954 CYP2D7A0A087X1C5 515 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 USP17L12C9JPN9 530 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 USP17L21D6R901 530 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 HMGCRP04035 888 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 MAPK4P31152 587 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 WDR78Q5VTH9 848 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 NUDT12Q9BQG2 462 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 PUS7LQ9H0K6 701 aaKnown RBP16.21■□□□□ 0.19
APOC4-202ENST00000592954 PORCNQ9H237 461 aa16.21■□□□□ 0.19
APOC4-202ENST00000592954 RPAP3Q9H6T3 665 aaPredicted RBP16.21■□□□□ 0.19
APOC4-202ENST00000592954 FARP2O94887 1054 aaPredicted RBP16.2■□□□□ 0.18
APOC4-202ENST00000592954 TRIM32Q13049 653 aa16.2■□□□□ 0.18
APOC4-202ENST00000592954 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
APOC4-202ENST00000592954 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
APOC4-202ENST00000592954 RABGAP1Q9Y3P9 1069 aa16.2■□□□□ 0.18
APOC4-202ENST00000592954 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
APOC4-202ENST00000592954 DOCK3Q8IZD9 2030 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 SMIM22K7EJ46 135 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 AKR1B1P15121 316 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 CDK8P49336 464 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 RRP1P56182 461 aaKnown RBP16.19■□□□□ 0.18
APOC4-202ENST00000592954 CCNA1P78396 465 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 C12orf60Q5U649 245 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 POTEEQ6S8J3 1075 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 GPR142Q7Z601 462 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 PLEKHH3Q7Z736 793 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 SOCS4Q8WXH5 440 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 HTATIP2Q9BUP3 242 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
APOC4-202ENST00000592954 HMX1Q9NP08 348 aaPredicted RBP16.19■□□□□ 0.18
APOC4-202ENST00000592954 DDX60LQ5H9U9 1706 aaKnown RBP16.19■□□□□ 0.18
APOC4-202ENST00000592954 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
APOC4-202ENST00000592954 H0YGN5 161 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 ATP2B2Q01814 1243 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 CLEC10AQ8IUN9 316 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 STK11IPQ8N1F8 1099 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 KBTBD3Q8NAB2 608 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 TRIB2Q92519 343 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 TANGO6Q9C0B7 1094 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 ARHGEF10LQ9HCE6 1279 aa16.18■□□□□ 0.18
APOC4-202ENST00000592954 PAK6Q9NQU5 681 aaPredicted RBP16.18■□□□□ 0.18
APOC4-202ENST00000592954 RNF113AO15541 343 aaKnown RBP16.17■□□□□ 0.18
APOC4-202ENST00000592954 CNMDO75829 334 aa16.17■□□□□ 0.18
APOC4-202ENST00000592954 GLRX3O76003 335 aaKnown RBP16.17■□□□□ 0.18
APOC4-202ENST00000592954 ZKSCAN1P17029 563 aaPredicted RBP16.17■□□□□ 0.18
APOC4-202ENST00000592954 RGS2P41220 211 aa16.17■□□□□ 0.18
APOC4-202ENST00000592954 ICA1Q05084 483 aa16.17■□□□□ 0.18
APOC4-202ENST00000592954 CTR9Q6PD62 1173 aa16.17■□□□□ 0.18
APOC4-202ENST00000592954 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
APOC4-202ENST00000592954 CCDC17Q96LX7 622 aa16.17■□□□□ 0.18
APOC4-202ENST00000592954 STRBPQ96SI9 672 aaKnown RBP16.17■□□□□ 0.18
APOC4-202ENST00000592954 RPTORQ8N122 1335 aa16.17■□□□□ 0.18
APOC4-202ENST00000592954 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
APOC4-202ENST00000592954 RAD21O60216 631 aa16.16■□□□□ 0.18
APOC4-202ENST00000592954 XRCC5P13010 732 aaKnown RBP16.16■□□□□ 0.18
APOC4-202ENST00000592954 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
APOC4-202ENST00000592954 COG2Q14746 738 aa16.16■□□□□ 0.18
APOC4-202ENST00000592954 C16orf86Q6ZW13 317 aa16.16■□□□□ 0.18
APOC4-202ENST00000592954 UBE2Q1Q7Z7E8 422 aa16.16■□□□□ 0.18
APOC4-202ENST00000592954 SPICE1Q8N0Z3 855 aa16.16■□□□□ 0.18
APOC4-202ENST00000592954 APPBP2Q92624 585 aa16.16■□□□□ 0.18
APOC4-202ENST00000592954 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms