RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 PRDM5Q9NQX1 630 aaPredicted RBP12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 PDLIM7Q9NR12 457 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 LRP2BPQ9P2M1 347 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 FLT1P17948 1338 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 TRIM43BA6NCK2 446 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 KBTBD13C9JR72 458 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 TRIM60Q495X7 471 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 WDR78Q5VTH9 848 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 MAPKAPK5Q8IW41 473 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 TRIM43Q96BQ3 446 aaPredicted RBP12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 TRIM34Q9BYJ4 488 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 AATFQ9NY61 560 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 PALD1Q9ULE6 856 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 IVNS1ABPQ9Y6Y0 642 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 MAST2Q6P0Q8 1798 aa12.47□□□□□ -0.41
SMCO4P1-201ENST00000592909 GH2P01242 217 aa12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 MCAMP43121 646 aa12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP14P54578 494 aa12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 GORABQ5T7V8 394 aa12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 OLFML2BQ68BL8 750 aa12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 NAA16Q6N069 864 aaPredicted RBP12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 BTBD7Q9P203 1132 aa12.46□□□□□ -0.41
SMCO4P1-201ENST00000592909 LAMA2P24043 3122 aaKnown RBP12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 SEPT4O43236 478 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 STRNO43815 780 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 IGSF3O75054 1194 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 HLA-DOAP06340 250 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 MTX1Q13505 466 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 DPP9Q86TI2 863 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 KIAA1683Q9H0B3 1180 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 ATAD5Q96QE3 1844 aa12.45□□□□□ -0.42
SMCO4P1-201ENST00000592909 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 E9PSI1 815 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 SRGAP3O43295 1099 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 VCAM1P19320 739 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 ITGB8P26012 769 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 ADCYAP1R1P41586 468 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 TLE2Q04725 743 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 LRRC41Q15345 812 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 ZYXQ15942 572 aaKnown RBP12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 MEIS3Q99687 375 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 FEZ1Q99689 392 aa12.44□□□□□ -0.42
SMCO4P1-201ENST00000592909 PRUNE2Q8WUY3 3088 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 KIAA0355O15063 1070 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 ADORA2AP29274 412 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 EPHB4P54760 987 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 PHF24Q9UPV7 400 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 EYSQ5T1H1 3165 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 SIPA1L1O43166 1804 aa12.43□□□□□ -0.42
SMCO4P1-201ENST00000592909 CDH23Q9H251 3354 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 CLTBP09497 229 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 ANO1Q5XXA6 986 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 FAM9BQ8IZU0 186 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 ACER1Q8TDN7 264 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 ATXN2LQ8WWM7 1075 aaKnown RBP12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 MOV10L1Q9BXT6 1211 aaKnown RBP12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 API5Q9BZZ5 524 aaKnown RBP12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 EHD4Q9H223 541 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 RPAP3Q9H6T3 665 aaPredicted RBP12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 SLC5A4Q9NY91 659 aa12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 NOB1Q9ULX3 412 aaKnown RBP12.42□□□□□ -0.42
SMCO4P1-201ENST00000592909 FRMPD3Q5JV73 1810 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 RLFQ13129 1914 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 ANP32CO43423 234 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 COBLO75128 1261 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 GNAI3P08754 354 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 DNAJB2P25686 324 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 PLA2G5P39877 138 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 COG2Q14746 738 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 RAB3GAP1Q15042 981 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 PRAMEF19Q5SWL8 479 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 SPATC1LQ9H0A9 340 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 HOXC10Q9NYD6 342 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 RAPGEFL1Q9UHV5 662 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 NRBP1Q9UHY1 535 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 SERPINB13Q9UIV8 391 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 DNAH12Q6ZR08 3092 aa12.41□□□□□ -0.42
SMCO4P1-201ENST00000592909 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
SMCO4P1-201ENST00000592909 NCOR1O75376 2440 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms