RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 RNF187Q5TA31 235 aaPredicted RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 ANKRD34AQ69YU3 496 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 C16orf86Q6ZW13 317 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 PHACTR4Q8IZ21 702 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 C12orf50Q8NA57 414 aaPredicted RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 KIF2CQ99661 725 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 PFDN2Q9UHV9 154 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 SUSD5O60279 629 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 DRD2P14416 443 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 RASSF7Q02833 373 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 DYMQ7RTS9 669 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 TMEM192Q8IY95 271 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 SYNPOQ8N3V7 929 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 SVOPQ8N4V2 548 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 C2CD4AQ8NCU7 369 aaPredicted RBP9.06□□□□□ -0.96
VMP1-215ENST00000592619 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 ISL2Q96A47 359 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 BRINP2Q9C0B6 783 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.06□□□□□ -0.96
VMP1-215ENST00000592619 PIDD1Q9HB75 910 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 SUCOQ9UBS9 1254 aaKnown RBP9.06□□□□□ -0.96
VMP1-215ENST00000592619 MKL2Q9ULH7 1088 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 LEMD3Q9Y2U8 911 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 PRKAB1Q9Y478 270 aa9.06□□□□□ -0.96
VMP1-215ENST00000592619 IQCA1LA6NCM1 817 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 FAM86C2PA6NEL3 165 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 UBOX5O94941 541 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 HCLS1P14317 486 aaPredicted RBP9.05□□□□□ -0.96
VMP1-215ENST00000592619 ASPAP45381 313 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 SLC10A6Q3KNW5 377 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 ZC3H12BQ5HYM0 836 aaKnown RBP9.05□□□□□ -0.96
VMP1-215ENST00000592619 FDX2Q6P4F2 183 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
VMP1-215ENST00000592619 SGSM3Q96HU1 749 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 SLC6A18Q96N87 628 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 SPATA9Q9BWV2 254 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 SLKQ9H2G2 1235 aaPredicted RBP9.05□□□□□ -0.96
VMP1-215ENST00000592619 ACTL7BQ9Y614 415 aa9.05□□□□□ -0.96
VMP1-215ENST00000592619 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
VMP1-215ENST00000592619 GBP1P32455 592 aa9.04□□□□□ -0.96
VMP1-215ENST00000592619 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
VMP1-215ENST00000592619 PRAMEF13Q5VWM6 474 aa9.04□□□□□ -0.96
VMP1-215ENST00000592619 SMYD4Q8IYR2 804 aaPredicted RBP9.04□□□□□ -0.96
VMP1-215ENST00000592619 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
VMP1-215ENST00000592619 FEZ1Q99689 392 aa9.04□□□□□ -0.96
VMP1-215ENST00000592619 FOXQ1Q9C009 403 aa9.04□□□□□ -0.96
VMP1-215ENST00000592619 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
VMP1-215ENST00000592619 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
VMP1-215ENST00000592619 PTCH2Q9Y6C5 1203 aa9.04□□□□□ -0.96
VMP1-215ENST00000592619 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.03□□□□□ -0.96
VMP1-215ENST00000592619 LRIG2O94898 1065 aa9.03□□□□□ -0.96
VMP1-215ENST00000592619 NAT2P11245 290 aa9.03□□□□□ -0.96
VMP1-215ENST00000592619 PTPROQ16827 1216 aa9.03□□□□□ -0.96
VMP1-215ENST00000592619 UBE3DQ7Z6J8 389 aa9.03□□□□□ -0.96
VMP1-215ENST00000592619 MFSD2AQ8NA29 543 aa9.03□□□□□ -0.96
VMP1-215ENST00000592619 ZSWIM2Q8NEG5 633 aa9.03□□□□□ -0.96
VMP1-215ENST00000592619 FAM105AQ9NUU6 356 aa9.03□□□□□ -0.96
VMP1-215ENST00000592619 ANKRD34BA5PLL1 514 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 ADCY3O60266 1144 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 RNGTTO60942 597 aaKnown RBP9.02□□□□□ -0.97
VMP1-215ENST00000592619 CLEC3AO75596 197 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 TCEA2Q15560 299 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 PPFIBP1Q86W92 1011 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 ZBTB38Q8NAP3 1195 aaPredicted RBP9.02□□□□□ -0.97
VMP1-215ENST00000592619 BAHD1Q8TBE0 780 aaPredicted RBP9.02□□□□□ -0.97
VMP1-215ENST00000592619 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
VMP1-215ENST00000592619 GPATCH3Q96I76 525 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 SLC26A8Q96RN1 970 aa9.02□□□□□ -0.97
VMP1-215ENST00000592619 DPH2Q9BQC3 489 aaPredicted RBP9.02□□□□□ -0.97
VMP1-215ENST00000592619 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
VMP1-215ENST00000592619 CCDC163A0A0D9SF12 145 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 PPP1R12AO14974 1030 aaPredicted RBP9.01□□□□□ -0.97
VMP1-215ENST00000592619 FAM153BP0C7A2 387 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 GYS2P54840 703 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 ANKRD39Q53RE8 183 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 TMEM67Q5HYA8 995 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 Q6ZS46 218 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.01□□□□□ -0.97
VMP1-215ENST00000592619 PPP1R13LQ8WUF5 828 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 LENG1Q96BZ8 264 aaPredicted RBP9.01□□□□□ -0.97
VMP1-215ENST00000592619 ACSS3Q9H6R3 686 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 SPC25Q9HBM1 224 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 IFT57Q9NWB7 429 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 SUSD2Q9UGT4 822 aa9.01□□□□□ -0.97
VMP1-215ENST00000592619 AGRPO00253 132 aa9□□□□□ -0.97
VMP1-215ENST00000592619 DNAJC6O75061 913 aa9□□□□□ -0.97
VMP1-215ENST00000592619 ARMCX6Q7L4S7 300 aa9□□□□□ -0.97
VMP1-215ENST00000592619 FILIP1Q7Z7B0 1213 aa9□□□□□ -0.97
VMP1-215ENST00000592619 AGGF1Q8N302 714 aaeCLIP9□□□□□ -0.97
VMP1-215ENST00000592619 HAUS7Q99871 368 aa9□□□□□ -0.97
VMP1-215ENST00000592619 CEP41Q9BYV8 373 aa9□□□□□ -0.97
VMP1-215ENST00000592619 AKTIPQ9H8T0 292 aa9□□□□□ -0.97
VMP1-215ENST00000592619 CEP131Q9UPN4 1083 aa9□□□□□ -0.97
VMP1-215ENST00000592619 C9IYK1 514 aa8.99□□□□□ -0.97
VMP1-215ENST00000592619 CDK11BP21127 795 aaKnown RBP8.99□□□□□ -0.97
VMP1-215ENST00000592619 IBSPP21815 317 aaPredicted RBP8.99□□□□□ -0.97
VMP1-215ENST00000592619 XP32Q5T750 250 aa8.99□□□□□ -0.97
VMP1-215ENST00000592619 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms