RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 MTMR2Q13614 643 aa22.21■■□□□ 1.15
TCF3-216ENST00000592395 ALX1Q15699 326 aa22.21■■□□□ 1.15
TCF3-216ENST00000592395 SH3D19Q5HYK7 790 aa22.21■■□□□ 1.15
TCF3-216ENST00000592395 COL13A1Q5TAT6 717 aaPredicted RBP22.21■■□□□ 1.15
TCF3-216ENST00000592395 GPAT2Q6NUI2 795 aa22.21■■□□□ 1.15
TCF3-216ENST00000592395 TMEM179Q6ZVK1 233 aa22.21■■□□□ 1.15
TCF3-216ENST00000592395 C19orf81C9J6K1 198 aa22.2■■□□□ 1.14
TCF3-216ENST00000592395 USP17L10C9JJH3 530 aa22.2■■□□□ 1.14
TCF3-216ENST00000592395 HSPD1P10809 573 aaKnown RBP22.2■■□□□ 1.14
TCF3-216ENST00000592395 GUCY1A2P33402 732 aa22.2■■□□□ 1.14
TCF3-216ENST00000592395 HMGCS2P54868 508 aa22.2■■□□□ 1.14
TCF3-216ENST00000592395 ZNF287Q9HBT7 754 aa22.2■■□□□ 1.14
TCF3-216ENST00000592395 AGTPBP1Q9UPW5 1226 aa22.2■■□□□ 1.14
TCF3-216ENST00000592395 SLC45A1Q9Y2W3 748 aa22.2■■□□□ 1.14
TCF3-216ENST00000592395 SLC3A2P08195 630 aaKnown RBP22.19■■□□□ 1.14
TCF3-216ENST00000592395 AKR1B1P15121 316 aa22.19■■□□□ 1.14
TCF3-216ENST00000592395 PPARAQ07869 468 aa22.19■■□□□ 1.14
TCF3-216ENST00000592395 SEPT2Q15019 361 aa22.19■■□□□ 1.14
TCF3-216ENST00000592395 ZNF296Q8WUU4 475 aaPredicted RBP22.19■■□□□ 1.14
TCF3-216ENST00000592395 MKNK2Q9HBH9 465 aa22.19■■□□□ 1.14
TCF3-216ENST00000592395 PPP4R2Q9NY27 417 aa22.19■■□□□ 1.14
TCF3-216ENST00000592395 TMOD4Q9NZQ9 345 aa22.19■■□□□ 1.14
TCF3-216ENST00000592395 ZMYM6O95789 1325 aa22.19■■□□□ 1.14
TCF3-216ENST00000592395 GREB1LQ9C091 1923 aaPredicted RBP22.18■■□□□ 1.14
TCF3-216ENST00000592395 STK11IPQ8N1F8 1099 aa22.18■■□□□ 1.14
TCF3-216ENST00000592395 PARK7Q99497 189 aaKnown RBP22.18■■□□□ 1.14
TCF3-216ENST00000592395 RAD50Q92878 1312 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 TLR2O60603 784 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 FKTNO75072 461 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 FGAP02671 866 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 RASA1P20936 1047 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 PDE4BQ07343 736 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 SKAP1Q86WV1 359 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 RUFY2Q8WXA3 655 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 FEZ1Q99689 392 aa22.17■■□□□ 1.14
TCF3-216ENST00000592395 CHMLP26374 656 aa22.16■■□□□ 1.14
TCF3-216ENST00000592395 USP14P54578 494 aa22.16■■□□□ 1.14
TCF3-216ENST00000592395 TREML2Q5T2D2 321 aa22.16■■□□□ 1.14
TCF3-216ENST00000592395 USP17L2Q6R6M4 530 aa22.16■■□□□ 1.14
TCF3-216ENST00000592395 KIAA1683Q9H0B3 1180 aa22.16■■□□□ 1.14
TCF3-216ENST00000592395 ANAPC4Q9UJX5 808 aa22.16■■□□□ 1.14
TCF3-216ENST00000592395 ICA1Q05084 483 aa22.15■■□□□ 1.14
TCF3-216ENST00000592395 PABPC4Q13310 644 aaKnown RBP eCLIP22.15■■□□□ 1.147e-7■■□□□ 13.4
TCF3-216ENST00000592395 DGKZQ13574 1117 aa22.15■■□□□ 1.14
TCF3-216ENST00000592395 ACER1Q8TDN7 264 aa22.15■■□□□ 1.14
TCF3-216ENST00000592395 PNMA3Q9UL41 463 aa22.15■■□□□ 1.14
TCF3-216ENST00000592395 LAMA4Q16363 1823 aa22.15■■□□□ 1.14
TCF3-216ENST00000592395 ADGRA2Q96PE1 1338 aa22.14■■□□□ 1.14
TCF3-216ENST00000592395 PRDM1O75626 825 aa22.14■■□□□ 1.13
TCF3-216ENST00000592395 BMP2KLQ5H9B9 411 aa22.14■■□□□ 1.13
TCF3-216ENST00000592395 ZNF444Q8N0Y2 327 aaPredicted RBP22.14■■□□□ 1.13
TCF3-216ENST00000592395 C12orf42Q96LP6 360 aa22.14■■□□□ 1.13
TCF3-216ENST00000592395 DSCC1Q9BVC3 393 aa22.14■■□□□ 1.13
TCF3-216ENST00000592395 KANSL2Q9H9L4 492 aa22.14■■□□□ 1.13
TCF3-216ENST00000592395 ARHGEF10LQ9HCE6 1279 aa22.14■■□□□ 1.13
TCF3-216ENST00000592395 EMILIN3Q9NT22 766 aa22.14■■□□□ 1.13
TCF3-216ENST00000592395 CYP2C8P10632 490 aa22.13■■□□□ 1.13
TCF3-216ENST00000592395 SP3Q02447 781 aa22.13■■□□□ 1.13
TCF3-216ENST00000592395 CTDSPL2Q05D32 466 aa22.13■■□□□ 1.13
TCF3-216ENST00000592395 ZYXQ15942 572 aaKnown RBP22.13■■□□□ 1.13
TCF3-216ENST00000592395 IL25Q9H293 177 aa22.13■■□□□ 1.13
TCF3-216ENST00000592395 SH2D4AQ9H788 454 aa22.13■■□□□ 1.13
TCF3-216ENST00000592395 A0A1W2PRG0 241 aa22.12■■□□□ 1.13
TCF3-216ENST00000592395 OSBPP22059 807 aa22.12■■□□□ 1.13
TCF3-216ENST00000592395 C17orf99Q6UX52 265 aa22.12■■□□□ 1.13
TCF3-216ENST00000592395 CLEC10AQ8IUN9 316 aa22.12■■□□□ 1.13
TCF3-216ENST00000592395 ERO1AQ96HE7 468 aa22.12■■□□□ 1.13
TCF3-216ENST00000592395 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.12■■□□□ 1.13
TCF3-216ENST00000592395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.12■■□□□ 1.13
TCF3-216ENST00000592395 PLIN4Q96Q06 1357 aa22.12■■□□□ 1.13
TCF3-216ENST00000592395 HOXA7P31268 230 aaPredicted RBP22.11■■□□□ 1.13
TCF3-216ENST00000592395 SIAH1Q8IUQ4 282 aa22.11■■□□□ 1.13
TCF3-216ENST00000592395 SMCR8Q8TEV9 937 aaPredicted RBP22.11■■□□□ 1.13
TCF3-216ENST00000592395 CPA4Q9UI42 421 aa22.11■■□□□ 1.13
TCF3-216ENST00000592395 EEF2P13639 858 aaKnown RBP22.1■■□□□ 1.13
TCF3-216ENST00000592395 CTU1Q7Z7A3 348 aaKnown RBP22.1■■□□□ 1.13
TCF3-216ENST00000592395 TNS4Q8IZW8 715 aa22.1■■□□□ 1.13
TCF3-216ENST00000592395 ASCC2Q9H1I8 757 aaPredicted RBP22.1■■□□□ 1.13
TCF3-216ENST00000592395 TMX2Q9Y320 296 aa22.1■■□□□ 1.13
TCF3-216ENST00000592395 MYH4Q9Y623 1939 aa22.1■■□□□ 1.13
TCF3-216ENST00000592395 IGKV6D-41A0A0C4DH26 115 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 ORC4O43929 436 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 FGRP09769 529 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 TSPY3P0CV98 308 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 TSPY8P0CW00 308 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 VCAM1P19320 739 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 HAND2P61296 217 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 IRX3P78415 501 aaPredicted RBP22.09■■□□□ 1.13
TCF3-216ENST00000592395 NEDD1Q8NHV4 660 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 NYAP2Q9P242 653 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 CTNNA3Q9UI47 895 aa22.09■■□□□ 1.13
TCF3-216ENST00000592395 SGSM2O43147 1006 aa22.08■■□□□ 1.13
TCF3-216ENST00000592395 BCRP11274 1271 aa22.08■■□□□ 1.13
TCF3-216ENST00000592395 PCP11498 1178 aaKnown RBP22.08■■□□□ 1.13
TCF3-216ENST00000592395 TFAP4Q01664 338 aa22.08■■□□□ 1.13
TCF3-216ENST00000592395 ATP2B2Q01814 1243 aa22.08■■□□□ 1.13
TCF3-216ENST00000592395 CD99L2Q8TCZ2 262 aa22.08■■□□□ 1.13
TCF3-216ENST00000592395 LPAR1Q92633 364 aa22.08■■□□□ 1.13
TCF3-216ENST00000592395 TSPY2A6NKD2 308 aa22.07■■□□□ 1.12
TCF3-216ENST00000592395 USP17L15C9J2P7 530 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms