RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 USP5P45974 858 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
APOC1-207ENST00000592176 USP14P54578 494 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
APOC1-207ENST00000592176 RAB3GAP1Q15042 981 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 TATDN1Q6P1N9 297 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 LPAR1Q92633 364 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 ZNF512BQ96KM6 892 aaPredicted RBP11.2□□□□□ -0.62
APOC1-207ENST00000592176 C12orf42Q96LP6 360 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 COL25A1Q9BXS0 654 aaPredicted RBP11.2□□□□□ -0.62
APOC1-207ENST00000592176 FLRT1Q9NZU1 646 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 DDX20Q9UHI6 824 aaKnown RBP11.2□□□□□ -0.62
APOC1-207ENST00000592176 IVNS1ABPQ9Y6Y0 642 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 HOXC6P09630 235 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 ATP8B2P98198 1209 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 CERKLQ49MI3 558 aaPredicted RBP11.19□□□□□ -0.62
APOC1-207ENST00000592176 TTC6Q86TZ1 520 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.19□□□□□ -0.62
APOC1-207ENST00000592176 ARRDC4Q8NCT1 418 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
APOC1-207ENST00000592176 FAM161BQ96MY7 647 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 CABP5Q9NP86 173 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 PIH1D3Q9NQM4 214 aaKnown RBP11.19□□□□□ -0.62
APOC1-207ENST00000592176 BTBD7Q9P203 1132 aa11.19□□□□□ -0.62
APOC1-207ENST00000592176 ALPK3Q96L96 1907 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 DNM1LO00429 736 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
APOC1-207ENST00000592176 TRIM27P14373 513 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 CYP2C19P33261 490 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 POLA2Q14181 598 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 ABCB5Q2M3G0 1257 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 DPP9Q86TI2 863 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 NPLOC4Q8TAT6 608 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 ACER1Q8TDN7 264 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 GUCD1Q96NT3 240 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 HOXC10Q9NYD6 342 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 SERPINB13Q9UIV8 391 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
APOC1-207ENST00000592176 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
APOC1-207ENST00000592176 STRNO43815 780 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 BCAR3O75815 825 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 IDH1O75874 414 aaKnown RBP11.17□□□□□ -0.62
APOC1-207ENST00000592176 RTP1P59025 263 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 GRB14Q14449 540 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 GJC2Q5T442 439 aaPredicted RBP11.17□□□□□ -0.62
APOC1-207ENST00000592176 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 LBX2Q6XYB7 198 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 SLC39A5Q6ZMH5 540 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 MIGA1Q8NAN2 632 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 TRPV1Q8NER1 839 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 CCDC8Q9H0W5 538 aaPredicted RBP11.17□□□□□ -0.62
APOC1-207ENST00000592176 EHD4Q9H223 541 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 RPAP3Q9H6T3 665 aaPredicted RBP11.17□□□□□ -0.62
APOC1-207ENST00000592176 TNNQ9UQP3 1299 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 ATP11BQ9Y2G3 1177 aa11.17□□□□□ -0.62
APOC1-207ENST00000592176 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
APOC1-207ENST00000592176 POLR3DP05423 398 aaPredicted RBP11.16□□□□□ -0.62
APOC1-207ENST00000592176 VCAM1P19320 739 aa11.16□□□□□ -0.62
APOC1-207ENST00000592176 COG2Q14746 738 aa11.16□□□□□ -0.62
APOC1-207ENST00000592176 SHHQ15465 462 aa11.16□□□□□ -0.62
APOC1-207ENST00000592176 MAGEB6Q8N7X4 407 aa11.16□□□□□ -0.62
APOC1-207ENST00000592176 LAMA3Q16787 3333 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
APOC1-207ENST00000592176 KBTBD13C9JR72 458 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
APOC1-207ENST00000592176 PLCD1P51178 756 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 MAP3K12Q12852 859 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 ANO1Q5XXA6 986 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 OLFML2BQ68BL8 750 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 TMEM57Q8N5G2 664 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 CDX2Q99626 313 aaPredicted RBP11.15□□□□□ -0.62
APOC1-207ENST00000592176 MOV10L1Q9BXT6 1211 aaKnown RBP11.15□□□□□ -0.62
APOC1-207ENST00000592176 SEMA6BQ9H3T3 888 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 PRDM5Q9NQX1 630 aaPredicted RBP11.15□□□□□ -0.62
APOC1-207ENST00000592176 SLC5A4Q9NY91 659 aa11.15□□□□□ -0.62
APOC1-207ENST00000592176 DBNLQ9UJU6 430 aaKnown RBP11.15□□□□□ -0.62
APOC1-207ENST00000592176 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
APOC1-207ENST00000592176 SEPT4O43236 478 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 IGHA2P01877 340 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 CYBAP13498 195 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 ADORA2AP29274 412 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 GUCY1A2P33402 732 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 SHMT1P34896 483 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 SEPT2Q15019 361 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 TMED8Q6PL24 325 aaPredicted RBP11.14□□□□□ -0.63
APOC1-207ENST00000592176 BADQ92934 168 aa11.14□□□□□ -0.63
APOC1-207ENST00000592176 EAF2Q96CJ1 260 aaPredicted RBP11.14□□□□□ -0.63
APOC1-207ENST00000592176 MPHOSPH10O00566 681 aaKnown RBP11.13□□□□□ -0.63
APOC1-207ENST00000592176 COBLO75128 1261 aa11.13□□□□□ -0.63
APOC1-207ENST00000592176 ERCC3P19447 782 aa11.13□□□□□ -0.63
APOC1-207ENST00000592176 ADCYAP1R1P41586 468 aa11.13□□□□□ -0.63
APOC1-207ENST00000592176 PLS1Q14651 629 aa11.13□□□□□ -0.63
APOC1-207ENST00000592176 C9orf50Q5SZB4 431 aa11.13□□□□□ -0.63
APOC1-207ENST00000592176 ZKSCAN2Q63HK3 967 aa11.13□□□□□ -0.63
APOC1-207ENST00000592176 SHCBP1Q8NEM2 672 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms