RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
TPM4-215ENST00000592138 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
TPM4-215ENST00000592138 OTUD7BQ6GQQ9 843 aa11.54□□□□□ -0.56
TPM4-215ENST00000592138 KIAA1211Q6ZU35 1233 aa11.54□□□□□ -0.56
TPM4-215ENST00000592138 FASTKD5Q7L8L6 764 aaKnown RBP11.54□□□□□ -0.56
TPM4-215ENST00000592138 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
TPM4-215ENST00000592138 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
TPM4-215ENST00000592138 LSG1Q9H089 658 aaKnown RBP11.54□□□□□ -0.56
TPM4-215ENST00000592138 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
TPM4-215ENST00000592138 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
TPM4-215ENST00000592138 SLC45A1Q9Y2W3 748 aa11.54□□□□□ -0.56
TPM4-215ENST00000592138 CCL15-CCL14A0A0B4J2E2 113 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 IGKV6D-41A0A0C4DH26 115 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
TPM4-215ENST00000592138 USP14P54578 494 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 PTH1RQ03431 593 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 SPP2Q13103 211 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 MOGSQ13724 837 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 RAB3GAP1Q15042 981 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 CCL15Q16663 113 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 SHROOM1Q2M3G4 852 aaPredicted RBP11.53□□□□□ -0.56
TPM4-215ENST00000592138 ANKRD23Q86SG2 305 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 BRI3BPQ8WY22 251 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 PTPN18Q99952 460 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 NBPF3Q9H094 633 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 KIAA1683Q9H0B3 1180 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 SH2D4AQ9H788 454 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
TPM4-215ENST00000592138 CASP8AP2Q9UKL3 1982 aa11.53□□□□□ -0.56
TPM4-215ENST00000592138 PHIPQ8WWQ0 1821 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 ATAD5Q96QE3 1844 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM4-215ENST00000592138 EIF5BO60841 1220 aaKnown RBP11.52□□□□□ -0.57
TPM4-215ENST00000592138 NOVP48745 357 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 ICA1Q05084 483 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 SEPT2Q15019 361 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 NOM1Q5C9Z4 860 aaKnown RBP11.52□□□□□ -0.57
TPM4-215ENST00000592138 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 NEDD1Q8NHV4 660 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
TPM4-215ENST00000592138 CNNM2Q9H8M5 875 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 ARHGEF10LQ9HCE6 1279 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 ANO2Q9NQ90 1003 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 NYAP2Q9P242 653 aa11.52□□□□□ -0.57
TPM4-215ENST00000592138 LAMA4Q16363 1823 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 GREB1LQ9C091 1923 aaPredicted RBP11.51□□□□□ -0.57
TPM4-215ENST00000592138 TSPY2A6NKD2 308 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 BTBD19C9JJ37 291 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 PRDM1O75626 825 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 REC8O95072 547 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 CYP21A2P08686 494 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 HAND2P61296 217 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 PABPC4Q13310 644 aaKnown RBP eCLIP11.51□□□□□ -0.57
TPM4-215ENST00000592138 MTMR2Q13614 643 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 USP17L2Q6R6M4 530 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 CCDC84Q86UT8 332 aaPredicted RBP11.51□□□□□ -0.57
TPM4-215ENST00000592138 ESR2Q92731 530 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 MKL1Q969V6 931 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 TCP11L1Q9NUJ3 509 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 RNF186Q9NXI6 227 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 MTMR4Q9NYA4 1195 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
TPM4-215ENST00000592138 AGTPBP1Q9UPW5 1226 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 TMX2Q9Y320 296 aa11.51□□□□□ -0.57
TPM4-215ENST00000592138 RBM8AQ9Y5S9 174 aaKnown RBP11.51□□□□□ -0.57
TPM4-215ENST00000592138 LOC285556D6RIA3 1793 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 TTLL1O95922 423 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 HMGCS2P54868 508 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 TFAP4Q01664 338 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 NECTIN1Q15223 517 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 GPAT2Q6NUI2 795 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 SIAH1Q8IUQ4 282 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 STK11IPQ8N1F8 1099 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 FAM43AQ8N2R8 423 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 LPAR1Q92633 364 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 FEZ1Q99689 392 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 KRT23Q9C075 422 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 GTF3C3Q9Y5Q9 886 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 TACC3Q9Y6A5 838 aa11.5□□□□□ -0.57
TPM4-215ENST00000592138 A0A1W2PRG0 241 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 CCDC85CA6NKD9 419 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 PDHXO00330 501 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 RANBP6O60518 1105 aaKnown RBP11.49□□□□□ -0.57
TPM4-215ENST00000592138 EEF2P13639 858 aaKnown RBP11.49□□□□□ -0.57
TPM4-215ENST00000592138 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
TPM4-215ENST00000592138 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 RNF20Q5VTR2 975 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 ACER1Q8TDN7 264 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 CEP95Q96GE4 821 aa11.49□□□□□ -0.57
TPM4-215ENST00000592138 PARK7Q99497 189 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms