RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 ZPR1O75312 459 aa19.13■□□□□ 0.65
CTDP1-207ENST00000591598 SMARCC1Q92922 1105 aaPredicted RBP19.13■□□□□ 0.65
CTDP1-207ENST00000591598 NSUN4Q96CB9 384 aaKnown RBP19.13■□□□□ 0.65
CTDP1-207ENST00000591598 BRMS1Q9HCU9 246 aa19.13■□□□□ 0.65
CTDP1-207ENST00000591598 ZNF804BA4D1E1 1349 aa19.13■□□□□ 0.65
CTDP1-207ENST00000591598 TROAPQ12815 778 aa19.13■□□□□ 0.65
CTDP1-207ENST00000591598 VSTM4Q8IW00 320 aa19.13■□□□□ 0.65
CTDP1-207ENST00000591598 ADAMTS3O15072 1205 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 SRBD1Q8N5C6 995 aaKnown RBP19.12■□□□□ 0.65
CTDP1-207ENST00000591598 RASGRP4Q8TDF6 673 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 GPKOWQ92917 476 aaPredicted RBP eCLIP19.12■□□□□ 0.65
CTDP1-207ENST00000591598 DESI2Q9BSY9 194 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 DCP1AQ9NPI6 582 aaPredicted RBP19.12■□□□□ 0.65
CTDP1-207ENST00000591598 MAPK8IP1Q9UQF2 711 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 URI1O94763 535 aaPredicted RBP19.12■□□□□ 0.65
CTDP1-207ENST00000591598 PTGDRQ13258 359 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 ERCC6LQ2NKX8 1250 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 DYNLL2Q96FJ2 89 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 CRNKL1Q9BZJ0 848 aaKnown RBP19.12■□□□□ 0.65
CTDP1-207ENST00000591598 NHSL1Q5SYE7 1610 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 ACTN4O43707 911 aaKnown RBP19.12■□□□□ 0.65
CTDP1-207ENST00000591598 SLU7O95391 586 aaKnown RBP19.12■□□□□ 0.65
CTDP1-207ENST00000591598 NGLY1Q96IV0 654 aa19.12■□□□□ 0.65
CTDP1-207ENST00000591598 RASSF8Q8NHQ8 419 aa19.11■□□□□ 0.65
CTDP1-207ENST00000591598 CHD4Q14839 1912 aa19.11■□□□□ 0.65
CTDP1-207ENST00000591598 FAM237AA0A1B0GTK4 181 aa19.11■□□□□ 0.65
CTDP1-207ENST00000591598 SF3B3Q15393 1217 aaKnown RBP19.11■□□□□ 0.65
CTDP1-207ENST00000591598 TTC38Q5R3I4 469 aa19.11■□□□□ 0.65
CTDP1-207ENST00000591598 SPATA31A5Q5VU36 1347 aa19.11■□□□□ 0.65
CTDP1-207ENST00000591598 SPATA31A7Q8IWB4 1347 aa19.11■□□□□ 0.65
CTDP1-207ENST00000591598 USP5P45974 858 aa19.1■□□□□ 0.65
CTDP1-207ENST00000591598 DIXDC1Q155Q3 683 aa19.1■□□□□ 0.65
CTDP1-207ENST00000591598 PLIN2Q99541 437 aa19.1■□□□□ 0.65
CTDP1-207ENST00000591598 COL14A1Q05707 1796 aaKnown RBP19.1■□□□□ 0.65
CTDP1-207ENST00000591598 CLEC4GQ6UXB4 293 aa19.1■□□□□ 0.65
CTDP1-207ENST00000591598 MED15Q96RN5 788 aa19.1■□□□□ 0.65
CTDP1-207ENST00000591598 PHF20Q9BVI0 1012 aa19.1■□□□□ 0.65
CTDP1-207ENST00000591598 MLKLQ8NB16 471 aa19.1■□□□□ 0.65
CTDP1-207ENST00000591598 TMTC3Q6ZXV5 915 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 AMIGO3Q86WK7 504 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 BAG1Q99933 345 aaPredicted RBP19.09■□□□□ 0.65
CTDP1-207ENST00000591598 BRIP1Q9BX63 1249 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 SAP30BPQ9UHR5 308 aaKnown RBP19.09■□□□□ 0.65
CTDP1-207ENST00000591598 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
CTDP1-207ENST00000591598 TEX33O43247 280 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 PRPF3O43395 683 aaKnown RBP19.09■□□□□ 0.65
CTDP1-207ENST00000591598 FUT2Q10981 343 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 MORC3Q14149 939 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 KARSQ15046 597 aaKnown RBP19.09■□□□□ 0.65
CTDP1-207ENST00000591598 SLC44A5Q8NCS7 719 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 CPVLQ9H3G5 476 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 DACH1Q9UI36 760 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 ANAPC4Q9UJX5 808 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
CTDP1-207ENST00000591598 TFAP4Q01664 338 aa19.08■□□□□ 0.65
CTDP1-207ENST00000591598 CGNQ9P2M7 1197 aaKnown RBP19.08■□□□□ 0.65
CTDP1-207ENST00000591598 CD44P16070 742 aaKnown RBP19.08■□□□□ 0.64
CTDP1-207ENST00000591598 CCT6AP40227 531 aaKnown RBP19.08■□□□□ 0.64
CTDP1-207ENST00000591598 KMT5BQ4FZB7 885 aa19.08■□□□□ 0.64
CTDP1-207ENST00000591598 PAGE5Q96GU1 130 aa19.08■□□□□ 0.64
CTDP1-207ENST00000591598 PSDA5PKW4 1024 aaPredicted RBP19.08■□□□□ 0.64
CTDP1-207ENST00000591598 FBXO38Q6PIJ6 1188 aa19.08■□□□□ 0.64
CTDP1-207ENST00000591598 CCDC34Q96HJ3 373 aa19.08■□□□□ 0.64
CTDP1-207ENST00000591598 MKNK2Q9HBH9 465 aa19.08■□□□□ 0.64
CTDP1-207ENST00000591598 USP17L3A6NCW0 530 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 USP17L4A6NCW7 530 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 ETF1P62495 437 aaKnown RBP19.07■□□□□ 0.64
CTDP1-207ENST00000591598 MTF1Q14872 753 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 SPECC1LQ69YQ0 1117 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 TOGARAM2Q6ZUX3 1019 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 USP17L1Q7RTZ2 530 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 FBXO33Q7Z6M2 555 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 STAG2Q8N3U4 1231 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 RBM28Q9NW13 759 aaKnown RBP19.07■□□□□ 0.64
CTDP1-207ENST00000591598 ROBO1Q9Y6N7 1651 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 ECM29Q5VYK3 1845 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 KIF2AO00139 706 aaPredicted RBP19.07■□□□□ 0.64
CTDP1-207ENST00000591598 PES1O00541 588 aaKnown RBP19.07■□□□□ 0.64
CTDP1-207ENST00000591598 GNG11P61952 73 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 TPTE2Q6XPS3 522 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 RASGRP2Q7LDG7 609 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 ERO1AQ96HE7 468 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 KAT14Q9H8E8 782 aa19.07■□□□□ 0.64
CTDP1-207ENST00000591598 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
CTDP1-207ENST00000591598 LRP5O75197 1615 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 GOLGA8HP0CJ92 632 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 ZBTB9Q96C00 473 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 CTNND2Q9UQB3 1225 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 EP400Q96L91 3159 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 SCG2P13521 617 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 KANK3Q6NY19 840 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 MNS1Q8NEH6 495 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 EEF2KMTQ96G04 330 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 PPP2R2CQ9Y2T4 447 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 ZNF579Q8NAF0 562 aaKnown RBP19.06■□□□□ 0.64
CTDP1-207ENST00000591598 ENOX1Q8TC92 643 aaKnown RBP19.06■□□□□ 0.64
CTDP1-207ENST00000591598 CNTNAP5Q8WYK1 1306 aa19.06■□□□□ 0.64
CTDP1-207ENST00000591598 CICQ96RK0 1608 aaPredicted RBP19.05■□□□□ 0.64
CTDP1-207ENST00000591598 SYNRGQ9UMZ2 1314 aa19.05■□□□□ 0.64
CTDP1-207ENST00000591598 SLFN14P0C7P3 912 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms