RNA–Protein interactions for RNA: ENST00000591436.5

TMC6-218, Transcript of transmembrane channel like 6, humanhuman

TSL 1 (best) BASIC

Gene TMC6, Length 1,155 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-218ENST00000591436 SHISA4Q96DD7 197 aa27.34■■□□□ 1.97
TMC6-218ENST00000591436 C12orf42Q96LP6 360 aa27.34■■□□□ 1.97
TMC6-218ENST00000591436 CEP290O15078 2479 aa27.34■■□□□ 1.97
TMC6-218ENST00000591436 GUCY1A2P33402 732 aa27.33■■□□□ 1.97
TMC6-218ENST00000591436 GJA8P48165 433 aa27.33■■□□□ 1.97
TMC6-218ENST00000591436 RRP1P56182 461 aaKnown RBP27.33■■□□□ 1.97
TMC6-218ENST00000591436 SLC44A5Q8NCS7 719 aa27.33■■□□□ 1.97
TMC6-218ENST00000591436 GTF3C2Q8WUA4 911 aaPredicted RBP27.33■■□□□ 1.97
TMC6-218ENST00000591436 DDRGK1Q96HY6 314 aa27.33■■□□□ 1.97
TMC6-218ENST00000591436 PAGR1Q9BTK6 254 aa27.33■■□□□ 1.97
TMC6-218ENST00000591436 PCDHB15Q9Y5E8 787 aa27.33■■□□□ 1.97
TMC6-218ENST00000591436 USP17L15C9J2P7 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L13C9JLJ4 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L11C9JVI0 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L18D6R9N7 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L22D6RA61 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L17D6RBQ6 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L19D6RCP7 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L20D6RJB6 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 USP17L24Q0WX57 530 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 TSHZ3Q63HK5 1081 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 AMOTL1Q8IY63 956 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 DYNLL2Q96FJ2 89 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 RBPJLQ9UBG7 517 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 SWAP70Q9UH65 585 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 SLC4A4Q9Y6R1 1079 aa27.32■■□□□ 1.96
TMC6-218ENST00000591436 PUS7LQ9H0K6 701 aaKnown RBP27.31■■□□□ 1.96
TMC6-218ENST00000591436 GJD2Q9UKL4 321 aa27.31■■□□□ 1.96
TMC6-218ENST00000591436 VCAM1P19320 739 aa27.3■■□□□ 1.96
TMC6-218ENST00000591436 ERVK-9P63128 1117 aa27.3■■□□□ 1.96
TMC6-218ENST00000591436 ERVK-24P63145 666 aa27.3■■□□□ 1.96
TMC6-218ENST00000591436 CCAR1Q8IX12 1150 aaKnown RBP27.3■■□□□ 1.96
TMC6-218ENST00000591436 CYP2D7A0A087X1C5 515 aa27.29■■□□□ 1.96
TMC6-218ENST00000591436 USP17L12C9JPN9 530 aa27.29■■□□□ 1.96
TMC6-218ENST00000591436 USP17L21D6R901 530 aa27.29■■□□□ 1.96
TMC6-218ENST00000591436 Q3C1V9 767 aa27.29■■□□□ 1.96
TMC6-218ENST00000591436 CATSPERGQ6ZRH7 1159 aa27.29■■□□□ 1.96
TMC6-218ENST00000591436 U2AF1L4Q8WU68 220 aaKnown RBP27.29■■□□□ 1.96
TMC6-218ENST00000591436 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
TMC6-218ENST00000591436 PLXNB2O15031 1838 aa27.29■■□□□ 1.96
TMC6-218ENST00000591436 C12orf60Q5U649 245 aa27.28■■□□□ 1.96
TMC6-218ENST00000591436 TMEM179Q6ZVK1 233 aa27.28■■□□□ 1.96
TMC6-218ENST00000591436 KBTBD3Q8NAB2 608 aa27.28■■□□□ 1.96
TMC6-218ENST00000591436 RPAP3Q9H6T3 665 aaPredicted RBP27.28■■□□□ 1.96
TMC6-218ENST00000591436 HMGCRP04035 888 aa27.27■■□□□ 1.96
TMC6-218ENST00000591436 MAPK4P31152 587 aa27.27■■□□□ 1.96
TMC6-218ENST00000591436 POTEEQ6S8J3 1075 aa27.27■■□□□ 1.96
TMC6-218ENST00000591436 NUDT12Q9BQG2 462 aa27.27■■□□□ 1.96
TMC6-218ENST00000591436 RABGAP1Q9Y3P9 1069 aa27.27■■□□□ 1.96
TMC6-218ENST00000591436 A0A1W2PRG0 241 aa27.26■■□□□ 1.95
TMC6-218ENST00000591436 SMIM22K7EJ46 135 aa27.26■■□□□ 1.95
TMC6-218ENST00000591436 SGPL1O95470 568 aa27.26■■□□□ 1.95
TMC6-218ENST00000591436 AKR1B1P15121 316 aa27.26■■□□□ 1.95
TMC6-218ENST00000591436 CYP2B6P20813 491 aa27.26■■□□□ 1.95
TMC6-218ENST00000591436 DEFB118Q96PH6 123 aa27.26■■□□□ 1.95
TMC6-218ENST00000591436 PORCNQ9H237 461 aa27.26■■□□□ 1.95
TMC6-218ENST00000591436 CWC22Q9HCG8 908 aaKnown RBP27.26■■□□□ 1.95
TMC6-218ENST00000591436 CDK8P49336 464 aa27.25■■□□□ 1.95
TMC6-218ENST00000591436 SOCS4Q8WXH5 440 aa27.25■■□□□ 1.95
TMC6-218ENST00000591436 STRBPQ96SI9 672 aaKnown RBP27.25■■□□□ 1.95
TMC6-218ENST00000591436 CRBNQ96SW2 442 aa27.25■■□□□ 1.95
TMC6-218ENST00000591436 RNF113AO15541 343 aaKnown RBP27.24■■□□□ 1.95
TMC6-218ENST00000591436 TFRCP02786 760 aaKnown RBP27.24■■□□□ 1.95
TMC6-218ENST00000591436 CTR9Q6PD62 1173 aa27.24■■□□□ 1.95
TMC6-218ENST00000591436 C16orf86Q6ZW13 317 aa27.24■■□□□ 1.95
TMC6-218ENST00000591436 APPBP2Q92624 585 aa27.24■■□□□ 1.95
TMC6-218ENST00000591436 CCDC17Q96LX7 622 aa27.24■■□□□ 1.95
TMC6-218ENST00000591436 PAK6Q9NQU5 681 aaPredicted RBP27.24■■□□□ 1.95
TMC6-218ENST00000591436 TTC41PQ6P2S7 1318 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 ERC2O15083 957 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 CNMDO75829 334 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 FARP2O94887 1054 aaPredicted RBP27.23■■□□□ 1.95
TMC6-218ENST00000591436 SLC34A2O95436 690 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 CCNA1P78396 465 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 ICA1Q05084 483 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 GPR142Q7Z601 462 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 PLEKHH3Q7Z736 793 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 CLEC10AQ8IUN9 316 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 OSBP2Q969R2 916 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 GCC1Q96CN9 775 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.23■■□□□ 1.953e-9■■■□□ 16.2
TMC6-218ENST00000591436 ARHGEF10LQ9HCE6 1279 aa27.23■■□□□ 1.95
TMC6-218ENST00000591436 ZFYP08048 801 aaPredicted RBP27.22■■□□□ 1.95
TMC6-218ENST00000591436 TRIM32Q13049 653 aa27.22■■□□□ 1.95
TMC6-218ENST00000591436 TRIB2Q92519 343 aa27.22■■□□□ 1.95
TMC6-218ENST00000591436 TANGO6Q9C0B7 1094 aa27.22■■□□□ 1.95
TMC6-218ENST00000591436 ARPP21Q9UBL0 812 aaPredicted RBP27.22■■□□□ 1.95
TMC6-218ENST00000591436 SPDYE16A6NNV3 312 aaPredicted RBP27.21■■□□□ 1.95
TMC6-218ENST00000591436 XRCC5P13010 732 aaKnown RBP27.21■■□□□ 1.95
TMC6-218ENST00000591436 WDR78Q5VTH9 848 aa27.21■■□□□ 1.95
TMC6-218ENST00000591436 LBX2Q6XYB7 198 aa27.21■■□□□ 1.95
TMC6-218ENST00000591436 UBE2Q1Q7Z7E8 422 aa27.21■■□□□ 1.95
TMC6-218ENST00000591436 OTUD7AQ8TE49 926 aaPredicted RBP27.21■■□□□ 1.95
TMC6-218ENST00000591436 DPF3Q92784 378 aa27.21■■□□□ 1.95
TMC6-218ENST00000591436 SH2D4AQ9H788 454 aa27.21■■□□□ 1.95
TMC6-218ENST00000591436 ZBTB47Q9UFB7 747 aaPredicted RBP27.21■■□□□ 1.95
TMC6-218ENST00000591436 LRRFIP1Q32MZ4 808 aaKnown RBP27.2■■□□□ 1.94
TMC6-218ENST00000591436 HMX1Q9NP08 348 aaPredicted RBP27.2■■□□□ 1.94
TMC6-218ENST00000591436 BTBD7Q9P203 1132 aa27.2■■□□□ 1.94
TMC6-218ENST00000591436 RPTORQ8N122 1335 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms