RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 ZBED3Q96IU2 234 aaPredicted RBP15.1■□□□□ 0.01
PTBP1-216ENST00000590887 CSRNP1Q96S65 589 aa15.1■□□□□ 0.01
PTBP1-216ENST00000590887 NCOA5Q9HCD5 579 aaKnown RBP15.1■□□□□ 0.01
PTBP1-216ENST00000590887 ADAMTSL1Q8N6G6 1762 aa15.1■□□□□ 0.01
PTBP1-216ENST00000590887 ZC3H4Q9UPT8 1303 aaKnown RBP15.1■□□□□ 0.01
PTBP1-216ENST00000590887 MPHOSPH10O00566 681 aaKnown RBP15.09■□□□□ 0.01
PTBP1-216ENST00000590887 DEXIO95424 95 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 TTLL1O95922 423 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 F13A1P00488 732 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 NCLP19338 710 aaKnown RBP15.09■□□□□ 0.01
PTBP1-216ENST00000590887 MCM4P33991 863 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
PTBP1-216ENST00000590887 CACNB3P54284 484 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 SKOR2Q2VWA4 1001 aaPredicted RBP15.09■□□□□ 0.01
PTBP1-216ENST00000590887 TATDN1Q6P1N9 297 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 TMEM179Q6ZVK1 233 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 APOBEC3FQ8IUX4 373 aaKnown RBP15.09■□□□□ 0.01
PTBP1-216ENST00000590887 SLC44A5Q8NCS7 719 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 C8orf76Q96K31 380 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 RNF26Q9BY78 433 aaPredicted RBP15.09■□□□□ 0.01
PTBP1-216ENST00000590887 KANSL2Q9H9L4 492 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTBP1-216ENST00000590887 RNF181Q9P0P0 153 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 SBF1O95248 1867 aa15.09■□□□□ 0.01
PTBP1-216ENST00000590887 CLRN2A0PK11 232 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0
PTBP1-216ENST00000590887 JAK2O60674 1132 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 BAG4O95429 457 aaKnown RBP15.08■□□□□ 0
PTBP1-216ENST00000590887 FMNL1O95466 1100 aaPredicted RBP15.08■□□□□ 0
PTBP1-216ENST00000590887 CTDNEP1O95476 244 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 SMARCA1P28370 1054 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 TROAPQ12815 778 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 SAFBQ15424 915 aaKnown RBP eCLIP15.08■□□□□ 0
PTBP1-216ENST00000590887 KIF4BQ2VIQ3 1234 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 TMEM47Q9BQJ4 181 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 IL17RBQ9NRM6 502 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 GINM1Q9NU53 330 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 SYNPO2Q9UMS6 1093 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 MTMR6Q9Y217 621 aa15.08■□□□□ 0
PTBP1-216ENST00000590887 SMIM22K7EJ46 135 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 SHMT1P34896 483 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 NOVP48745 357 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 ABCB5Q2M3G0 1257 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 ATL3Q6DD88 541 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 CCDC144CPQ8IYA2 1237 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
PTBP1-216ENST00000590887 MYL10Q9BUA6 226 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 SLC26A6Q9BXS9 759 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 SENP2Q9HC62 589 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 MTMR4Q9NYA4 1195 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 GPRC5DQ9NZD1 345 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 PCDHAC2Q9Y5I4 1007 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 PPP2R3BQ9Y5P8 575 aa15.07■□□□□ 0
PTBP1-216ENST00000590887 PRPF3O43395 683 aaKnown RBP15.06■□□□□ 0
PTBP1-216ENST00000590887 PARP1P09874 1014 aaKnown RBP15.06■□□□□ 0
PTBP1-216ENST00000590887 RXRAP19793 462 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 CDC27P30260 824 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 GRM4Q14833 912 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 DCAF15Q66K64 600 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 RCSD1Q6JBY9 416 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 ZFPM1Q8IX07 1006 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 CEP95Q96GE4 821 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 ALG1Q9BT22 464 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 NYAP2Q9P242 653 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 CFAP45Q9UL16 551 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
PTBP1-216ENST00000590887 NMT2O60551 498 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 AKR1B1P15121 316 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 EVX2Q03828 476 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 GNL2Q13823 731 aaKnown RBP15.05■□□□□ -0
PTBP1-216ENST00000590887 PKP1Q13835 747 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 NTRK3Q16288 839 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 NBPF9Q3BBW0 867 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 ASPRV1Q53RT3 343 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 C9orf131Q5VYM1 1079 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 TMTC3Q6ZXV5 915 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 RAB11FIP4Q86YS3 637 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 FBXO18Q8NFZ0 1043 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 NKX2-3Q8TAU0 364 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 ZNF396Q96N95 335 aaPredicted RBP15.05■□□□□ -0
PTBP1-216ENST00000590887 SH2D4AQ9H788 454 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 BRMS1Q9HCU9 246 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 FAM217BQ9NTX9 383 aaPredicted RBP15.05■□□□□ -0
PTBP1-216ENST00000590887 ZNF541Q9H0D2 1346 aa15.05■□□□□ -0
PTBP1-216ENST00000590887 IGKV6D-41A0A0C4DH26 115 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 PRELPP51888 382 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 KRT85P78386 507 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 NBR1Q14596 966 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 RASA3Q14644 834 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
PTBP1-216ENST00000590887 GPATCH4Q5T3I0 446 aaKnown RBP15.04■□□□□ -0
PTBP1-216ENST00000590887 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
PTBP1-216ENST00000590887 MCTP1Q6DN14 999 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 SH3BP5LQ7L8J4 393 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 BRAPQ7Z569 592 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
PTBP1-216ENST00000590887 MKL1Q969V6 931 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 SCAND2PQ9GZW5 306 aaPredicted RBP15.04■□□□□ -0
PTBP1-216ENST00000590887 ARHGEF10LQ9HCE6 1279 aa15.04■□□□□ -0
PTBP1-216ENST00000590887 ADARB2Q9NS39 739 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms