RNA–Protein interactions for RNA: ENST00000590699.5

CARM1-209, Transcript of coactivator associated arginine methyltransferase 1, human

TSL 5

Gene CARM1, Length 2,240 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARM1-209	ENST00000590699	RASSF7	Q02833	373 aa		32.52	■■■□□ 2.8
CARM1-209	ENST00000590699	JDP2	Q8WYK2	163 aa		32.52	■■■□□ 2.8
CARM1-209	ENST00000590699	CCDC69	A6NI79	296 aa		32.51	■■■□□ 2.8
CARM1-209	ENST00000590699	CEBPZ	Q03701	1054 aa	Known RBP	32.51	■■■□□ 2.8
CARM1-209	ENST00000590699	MICU3	Q86XE3	530 aa		32.51	■■■□□ 2.8
CARM1-209	ENST00000590699	MKNK2	Q9HBH9	465 aa		32.51	■■■□□ 2.8
CARM1-209	ENST00000590699	TNKS	O95271	1327 aa		32.51	■■■□□ 2.8
CARM1-209	ENST00000590699	ORC4	O43929	436 aa		32.51	■■■□□ 2.79
CARM1-209	ENST00000590699	APOA5	Q6Q788	366 aa		32.51	■■■□□ 2.79
CARM1-209	ENST00000590699	VIL1	P09327	827 aa	Known RBP	32.5	■■■□□ 2.79
CARM1-209	ENST00000590699	LIFR	P42702	1097 aa		32.5	■■■□□ 2.79
CARM1-209	ENST00000590699	SERPINA10	Q9UK55	444 aa		32.5	■■■□□ 2.79
CARM1-209	ENST00000590699	NFIA	Q12857	509 aa		32.5	■■■□□ 2.79
CARM1-209	ENST00000590699	MRI	Q9BWK5	157 aa		32.5	■■■□□ 2.79
CARM1-209	ENST00000590699	DNAJC25	Q9H1X3	360 aa		32.5	■■■□□ 2.79
CARM1-209	ENST00000590699	SLC12A7	Q9Y666	1083 aa		32.5	■■■□□ 2.79
CARM1-209	ENST00000590699	TSPY2	A6NKD2	308 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	NMT2	O60551	498 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	ZNF165	P49910	485 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	HDLBP	Q00341	1268 aa	Known RBP	32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	CFAP100	Q494V2	611 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	ATL3	Q6DD88	541 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	IQCA1	Q86XH1	822 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	CXCL9	Q07325	125 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	SGMS1	Q86VZ5	419 aa		32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	FTO	Q9C0B1	505 aa	Known RBP eCLIP	32.49	■■■□□ 2.79
CARM1-209	ENST00000590699	PSME4	Q14997	1843 aa		32.48	■■■□□ 2.79
CARM1-209	ENST00000590699	CAVIN2	O95810	425 aa		32.48	■■■□□ 2.79
CARM1-209	ENST00000590699	PLA2G4D	Q86XP0	818 aa		32.48	■■■□□ 2.79
CARM1-209	ENST00000590699	CHMP4C	Q96CF2	233 aa		32.48	■■■□□ 2.79
CARM1-209	ENST00000590699	FOCAD	Q5VW36	1801 aa		32.48	■■■□□ 2.79
CARM1-209	ENST00000590699	ZBTB43	O43298	467 aa		32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	PTGS1	P23219	599 aa		32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	METAP2	P50579	478 aa	Known RBP eCLIP	32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	TCP10	Q12799	353 aa		32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	ENAH	Q8N8S7	591 aa	Predicted RBP	32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	USP28	Q96RU2	1077 aa		32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	ZNF75D	P51815	510 aa		32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	CCAR1	Q8IX12	1150 aa	Known RBP	32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	ZNF396	Q96N95	335 aa	Predicted RBP	32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	TDRD3	Q9H7E2	651 aa	Known RBP	32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	ARFGEF1	Q9Y6D6	1849 aa		32.47	■■■□□ 2.79
CARM1-209	ENST00000590699	TFAP4	Q01664	338 aa		32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	MYO3B	Q8WXR4	1341 aa		32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	CPLX1	O14810	134 aa		32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	SEC23A	Q15436	765 aa		32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	SYNE3	Q6ZMZ3	975 aa		32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	PRMT6	Q96LA8	375 aa	Predicted RBP	32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	SYT17	Q9BSW7	474 aa		32.46	■■■□□ 2.79
CARM1-209	ENST00000590699	TRIM5	Q9C035	493 aa		32.45	■■■□□ 2.79
CARM1-209	ENST00000590699	ROBO3	Q96MS0	1386 aa		32.45	■■■□□ 2.79
CARM1-209	ENST00000590699	CTAGE5	O15320	804 aa		32.45	■■■□□ 2.78
CARM1-209	ENST00000590699	ZFPM1	Q8IX07	1006 aa		32.45	■■■□□ 2.78
CARM1-209	ENST00000590699	ZNF444	Q8N0Y2	327 aa	Predicted RBP	32.45	■■■□□ 2.78
CARM1-209	ENST00000590699	OGFOD1	Q8N543	542 aa		32.45	■■■□□ 2.78
CARM1-209	ENST00000590699	GOLPH3L	Q9H4A5	285 aa		32.45	■■■□□ 2.78
CARM1-209	ENST00000590699	GTF2F1	P35269	517 aa	Known RBP eCLIP	32.44	■■■□□ 2.78	3e-10	■■■■□ 24.2
CARM1-209	ENST00000590699	CDK8	P49336	464 aa		32.44	■■■□□ 2.78
CARM1-209	ENST00000590699	DDX60L	Q5H9U9	1706 aa	Known RBP	32.44	■■■□□ 2.78
CARM1-209	ENST00000590699	IFIT1B	Q5T764	474 aa	Known RBP	32.44	■■■□□ 2.78
CARM1-209	ENST00000590699	GML	Q99445	158 aa		32.44	■■■□□ 2.78
CARM1-209	ENST00000590699	OSBPL5	Q9H0X9	879 aa	Predicted RBP	32.44	■■■□□ 2.78
CARM1-209	ENST00000590699	ECM29	Q5VYK3	1845 aa		32.44	■■■□□ 2.78
CARM1-209	ENST00000590699	GOLGA8A	A7E2F4	631 aa		32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	DHX16	O60231	1041 aa	Known RBP	32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	MTERF4	Q7Z6M4	381 aa	Known RBP	32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	TMTC2	Q8N394	836 aa		32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	NUP133	Q8WUM0	1156 aa		32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	MTA3	Q9BTC8	594 aa		32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	CDC27	P30260	824 aa		32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	PRELP	P51888	382 aa		32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	CIAPIN1	Q6FI81	312 aa		32.43	■■■□□ 2.78
CARM1-209	ENST00000590699	GUCY1B3	Q02153	619 aa		32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	C16orf86	Q6ZW13	317 aa		32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	CCDC186	Q7Z3E2	898 aa		32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	HDAC9	Q9UKV0	1011 aa		32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	TSPY3	P0CV98	308 aa		32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	TSPY8	P0CW00	308 aa		32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	FDPS	P14324	419 aa	Known RBP	32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	SNW1	Q13573	536 aa	Known RBP	32.42	■■■□□ 2.78
CARM1-209	ENST00000590699	CCDC73	Q6ZRK6	1079 aa		32.41	■■■□□ 2.78
CARM1-209	ENST00000590699	DRC7	Q8IY82	874 aa		32.41	■■■□□ 2.78
CARM1-209	ENST00000590699	ZNF654	Q8IZM8	581 aa		32.41	■■■□□ 2.78
CARM1-209	ENST00000590699	RASA1	P20936	1047 aa		32.41	■■■□□ 2.78
CARM1-209	ENST00000590699	ZNF287	Q9HBT7	754 aa		32.41	■■■□□ 2.78
CARM1-209	ENST00000590699	IQCB1	Q15051	598 aa		32.4	■■■□□ 2.78
CARM1-209	ENST00000590699	DLGAP5	Q15398	846 aa		32.39	■■■□□ 2.78
CARM1-209	ENST00000590699	STX1A	Q16623	288 aa		32.39	■■■□□ 2.78
CARM1-209	ENST00000590699	ARHGAP27	Q6ZUM4	889 aa		32.39	■■■□□ 2.78
CARM1-209	ENST00000590699	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	32.39	■■■□□ 2.78
CARM1-209	ENST00000590699	ENGASE	Q8NFI3	743 aa		32.39	■■■□□ 2.78
CARM1-209	ENST00000590699	FAM198A	Q9UFP1	575 aa		32.39	■■■□□ 2.78
CARM1-209	ENST00000590699	TAOK2	Q9UL54	1235 aa		32.39	■■■□□ 2.78
CARM1-209	ENST00000590699	SLURP2	P0DP57	97 aa		32.38	■■■□□ 2.77
CARM1-209	ENST00000590699	FAM160A1	Q05DH4	1040 aa		32.38	■■■□□ 2.77
CARM1-209	ENST00000590699	C11orf57	Q6ZUT1	292 aa	Predicted RBP	32.38	■■■□□ 2.77
CARM1-209	ENST00000590699	AGBL3	Q8NEM8	1001 aa		32.38	■■■□□ 2.77
CARM1-209	ENST00000590699	NRBP1	Q9UHY1	535 aa		32.38	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms