RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 HAND2P61296 217 aa25.29■■□□□ 1.64
ATG4D-212ENST00000590096 PROCA1Q8NCQ7 364 aaPredicted RBP25.29■■□□□ 1.64
ATG4D-212ENST00000590096 PRDM10Q9NQV6 1147 aa25.29■■□□□ 1.64
ATG4D-212ENST00000590096 TMOD4Q9NZQ9 345 aa25.29■■□□□ 1.64
ATG4D-212ENST00000590096 ZNF213O14771 459 aa25.28■■□□□ 1.64
ATG4D-212ENST00000590096 HSPA8P11142 646 aaKnown RBP25.28■■□□□ 1.64
ATG4D-212ENST00000590096 ICA1Q05084 483 aa25.28■■□□□ 1.64
ATG4D-212ENST00000590096 MOGSQ13724 837 aa25.28■■□□□ 1.64
ATG4D-212ENST00000590096 TAF1CQ15572 869 aaPredicted RBP25.28■■□□□ 1.64
ATG4D-212ENST00000590096 SH3D19Q5HYK7 790 aa25.28■■□□□ 1.64
ATG4D-212ENST00000590096 KIAA1211Q6ZU35 1233 aa25.28■■□□□ 1.64
ATG4D-212ENST00000590096 ESYT1Q9BSJ8 1104 aa25.28■■□□□ 1.64
ATG4D-212ENST00000590096 TBC1D8O95759 1140 aa25.27■■□□□ 1.64
ATG4D-212ENST00000590096 USP14P54578 494 aa25.27■■□□□ 1.64
ATG4D-212ENST00000590096 IMMTQ16891 758 aaKnown RBP25.27■■□□□ 1.64
ATG4D-212ENST00000590096 CFHR5Q9BXR6 569 aa25.27■■□□□ 1.64
ATG4D-212ENST00000590096 KANSL2Q9H9L4 492 aa25.27■■□□□ 1.64
ATG4D-212ENST00000590096 ARHGEF10LQ9HCE6 1279 aa25.27■■□□□ 1.64
ATG4D-212ENST00000590096 TOMM22Q9NS69 142 aa25.27■■□□□ 1.64
ATG4D-212ENST00000590096 LAMA4Q16363 1823 aa25.27■■□□□ 1.64
ATG4D-212ENST00000590096 LOC285556D6RIA3 1793 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 PDHXO00330 501 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 TSPY3P0CV98 308 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 TSPY8P0CW00 308 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 LBX1P52954 281 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 USP17L2Q6R6M4 530 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 ACER1Q8TDN7 264 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 RNF41Q9H4P4 317 aaPredicted RBP25.26■■□□□ 1.63
ATG4D-212ENST00000590096 SH2D4AQ9H788 454 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 ZFYVE28Q9HCC9 887 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 AGTPBP1Q9UPW5 1226 aa25.26■■□□□ 1.63
ATG4D-212ENST00000590096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.26■■□□□ 1.63
ATG4D-212ENST00000590096 PTH1RQ03431 593 aa25.25■■□□□ 1.63
ATG4D-212ENST00000590096 CRHR2Q13324 411 aa25.25■■□□□ 1.63
ATG4D-212ENST00000590096 ZYXQ15942 572 aaKnown RBP25.25■■□□□ 1.63
ATG4D-212ENST00000590096 GPAT2Q6NUI2 795 aa25.25■■□□□ 1.63
ATG4D-212ENST00000590096 MFSD6Q6ZSS7 791 aa25.25■■□□□ 1.63
ATG4D-212ENST00000590096 KIAA1683Q9H0B3 1180 aa25.25■■□□□ 1.63
ATG4D-212ENST00000590096 U3KPZ7 1027 aaPredicted RBP25.25■■□□□ 1.63
ATG4D-212ENST00000590096 GREB1LQ9C091 1923 aaPredicted RBP25.25■■□□□ 1.63
ATG4D-212ENST00000590096 ORC4O43929 436 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 RANBP6O60518 1105 aaKnown RBP25.24■■□□□ 1.63
ATG4D-212ENST00000590096 PCP11498 1178 aaKnown RBP25.24■■□□□ 1.63
ATG4D-212ENST00000590096 TFAP4Q01664 338 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 ATP2B2Q01814 1243 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 PABPC4Q13310 644 aaKnown RBP eCLIP25.24■■□□□ 1.63
ATG4D-212ENST00000590096 DGKZQ13574 1117 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 RRP12Q5JTH9 1297 aaKnown RBP25.24■■□□□ 1.63
ATG4D-212ENST00000590096 AKNAD1Q5T1N1 836 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 CLEC10AQ8IUN9 316 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 INCENPQ9NQS7 918 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 SLC45A1Q9Y2W3 748 aa25.24■■□□□ 1.63
ATG4D-212ENST00000590096 PLIN4Q96Q06 1357 aa25.23■■□□□ 1.63
ATG4D-212ENST00000590096 TSPY2A6NKD2 308 aa25.23■■□□□ 1.63
ATG4D-212ENST00000590096 FGRP09769 529 aa25.23■■□□□ 1.63
ATG4D-212ENST00000590096 FAM47AQ5JRC9 791 aa25.23■■□□□ 1.63
ATG4D-212ENST00000590096 TREML2Q5T2D2 321 aa25.23■■□□□ 1.63
ATG4D-212ENST00000590096 TBC1D10CQ8IV04 446 aa25.23■■□□□ 1.63
ATG4D-212ENST00000590096 STAG1Q8WVM7 1258 aa25.23■■□□□ 1.63
ATG4D-212ENST00000590096 PARK7Q99497 189 aaKnown RBP25.23■■□□□ 1.63
ATG4D-212ENST00000590096 EEF2P13639 858 aaKnown RBP25.22■■□□□ 1.63
ATG4D-212ENST00000590096 NEDD1Q8NHV4 660 aa25.22■■□□□ 1.63
ATG4D-212ENST00000590096 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.22■■□□□ 1.63
ATG4D-212ENST00000590096 NBPF3Q9H094 633 aa25.22■■□□□ 1.63
ATG4D-212ENST00000590096 ANO2Q9NQ90 1003 aa25.22■■□□□ 1.63
ATG4D-212ENST00000590096 EMILIN3Q9NT22 766 aa25.22■■□□□ 1.63
ATG4D-212ENST00000590096 PNMA3Q9UL41 463 aa25.22■■□□□ 1.63
ATG4D-212ENST00000590096 A0A1W2PRG0 241 aa25.21■■□□□ 1.63
ATG4D-212ENST00000590096 MAP4K1Q92918 833 aa25.21■■□□□ 1.63
ATG4D-212ENST00000590096 C12orf42Q96LP6 360 aa25.21■■□□□ 1.63
ATG4D-212ENST00000590096 R3HDMLQ9H3Y0 253 aa25.21■■□□□ 1.63
ATG4D-212ENST00000590096 TACC3Q9Y6A5 838 aa25.21■■□□□ 1.63
ATG4D-212ENST00000590096 OSBPP22059 807 aa25.2■■□□□ 1.62
ATG4D-212ENST00000590096 PPP4R3BQ5MIZ7 849 aa25.2■■□□□ 1.62
ATG4D-212ENST00000590096 LSG1Q9H089 658 aaKnown RBP25.2■■□□□ 1.62
ATG4D-212ENST00000590096 NYAP2Q9P242 653 aa25.2■■□□□ 1.62
ATG4D-212ENST00000590096 TMX2Q9Y320 296 aa25.2■■□□□ 1.62
ATG4D-212ENST00000590096 IGKV6D-41A0A0C4DH26 115 aa25.19■■□□□ 1.62
ATG4D-212ENST00000590096 GPR25O00155 361 aa25.19■■□□□ 1.62
ATG4D-212ENST00000590096 NOM1Q5C9Z4 860 aaKnown RBP25.19■■□□□ 1.62
ATG4D-212ENST00000590096 SIAH1Q8IUQ4 282 aa25.19■■□□□ 1.62
ATG4D-212ENST00000590096 CEP95Q96GE4 821 aa25.19■■□□□ 1.62
ATG4D-212ENST00000590096 MTMR4Q9NYA4 1195 aa25.19■■□□□ 1.62
ATG4D-212ENST00000590096 RBM8AQ9Y5S9 174 aaKnown RBP25.19■■□□□ 1.62
ATG4D-212ENST00000590096 NEDD4P46934 1319 aa25.18■■□□□ 1.62
ATG4D-212ENST00000590096 TLR2O60603 784 aa25.18■■□□□ 1.62
ATG4D-212ENST00000590096 TTLL1O95922 423 aa25.18■■□□□ 1.62
ATG4D-212ENST00000590096 CYP2C8P10632 490 aa25.18■■□□□ 1.62
ATG4D-212ENST00000590096 NT5C2P49902 561 aa25.18■■□□□ 1.62
ATG4D-212ENST00000590096 IRX3P78415 501 aaPredicted RBP25.18■■□□□ 1.62
ATG4D-212ENST00000590096 SMCR8Q8TEV9 937 aaPredicted RBP25.18■■□□□ 1.62
ATG4D-212ENST00000590096 ESR2Q92731 530 aa25.18■■□□□ 1.62
ATG4D-212ENST00000590096 GOPCQ9HD26 462 aa25.18■■□□□ 1.62
ATG4D-212ENST00000590096 VCAM1P19320 739 aa25.17■■□□□ 1.62
ATG4D-212ENST00000590096 HOXA7P31268 230 aaPredicted RBP25.17■■□□□ 1.62
ATG4D-212ENST00000590096 LPAR1Q92633 364 aa25.17■■□□□ 1.62
ATG4D-212ENST00000590096 VCPKMTQ9H867 229 aa25.17■■□□□ 1.62
ATG4D-212ENST00000590096 CNNM2Q9H8M5 875 aa25.17■■□□□ 1.62
ATG4D-212ENST00000590096 CLIP2Q9UDT6 1046 aa25.17■■□□□ 1.62
ATG4D-212ENST00000590096 MYH4Q9Y623 1939 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms