RNA–Protein interactions for RNA: ENST00000590039.5

CARM1-208, Transcript of coactivator associated arginine methyltransferase 1, human

TSL 5

Gene CARM1, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARM1-208	ENST00000590039	NFIA	Q12857	509 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	GJC2	Q5T442	439 aa	Predicted RBP	13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	C1orf53	Q5VUE5	145 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	CCDC129	Q6ZRS4	1044 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	CCDC84	Q86UT8	332 aa	Predicted RBP	13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	MICALL1	Q8N3F8	863 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	XAGE2	Q96GT9	111 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	PHOX2B	Q99453	314 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	CD320	Q9NPF0	282 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	GPR108	Q9NPR9	543 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	PCDHB15	Q9Y5E8	787 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	CACNA1B	Q00975	2339 aa		13.76	□□□□□ -0.21
CARM1-208	ENST00000590039	HMMR	O75330	724 aa		13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	FRAT2	O75474	233 aa	Predicted RBP	13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	PHKA1	P46020	1223 aa		13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	MORN1	Q5T089	497 aa		13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	CCDC102B	Q68D86	513 aa		13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	HERVK_113	Q902F9	699 aa		13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	UIMC1	Q96RL1	719 aa		13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	TACC3	Q9Y6A5	838 aa		13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.75	□□□□□ -0.21
CARM1-208	ENST00000590039	GBF1	Q92538	1859 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	KIAA0355	O15063	1070 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	PEX10	O60683	326 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	CLTB	P09497	229 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	TLE2	Q04725	743 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	CHAF1A	Q13111	956 aa	Predicted RBP	13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	SKIV2L	Q15477	1246 aa	Known RBP	13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	HSP90AB4P	Q58FF6	505 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	TNNI3K	Q59H18	835 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	RASIP1	Q5U651	963 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	EAF2	Q96CJ1	260 aa	Predicted RBP	13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.74	□□□□□ -0.21	8e-8	■■■■□ 19.3
CARM1-208	ENST00000590039	FAM198A	Q9UFP1	575 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	FPGT-TNNI3K	V9GXZ4	949 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	CACNA1G	O43497	2377 aa		13.74	□□□□□ -0.21
CARM1-208	ENST00000590039	KBTBD13	C9JR72	458 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	ZBTB22	O15209	634 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	RAG1	P15918	1043 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	HHIPL2	Q6UWX4	724 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	RHPN1	Q8TCX5	695 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	TBC1D22A	Q8WUA7	517 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	TXNRD2	Q9NNW7	524 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	GNL3L	Q9NVN8	582 aa	Known RBP	13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	FLRT1	Q9NZU1	646 aa		13.73	□□□□□ -0.21
CARM1-208	ENST00000590039	MAST3	O60307	1309 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	APBB1	O00213	710 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	RAB11FIP3	O75154	756 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	CNGA1	P29973	690 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	MAPK4	P31152	587 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	MFSD14C	Q5VZR4	134 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	GPR142	Q7Z601	462 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	ERC1	Q8IUD2	1116 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	ZFPM1	Q8IX07	1006 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	ARRDC4	Q8NCT1	418 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	TRPV1	Q8NER1	839 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	EXOC6	Q8TAG9	804 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	DCTPP1	Q9H773	170 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	COG5	Q9UP83	839 aa		13.72	□□□□□ -0.21
CARM1-208	ENST00000590039	SEMA3E	O15041	775 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	CTNND1	O60716	968 aa	Known RBP	13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	RAB30	Q15771	203 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	GORAB	Q5T7V8	394 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	CDC42EP5	Q6NZY7	148 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	GPRC5A	Q8NFJ5	357 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	WDR66	Q8TBY9	1149 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	DBNDD2	Q9BQY9	259 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	PORCN	Q9H237	461 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	NKX2-4	Q9H2Z4	354 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	IL1RAPL2	Q9NP60	686 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	DENND2A	Q9ULE3	1009 aa		13.71	□□□□□ -0.21
CARM1-208	ENST00000590039	DCHS1	Q96JQ0	3298 aa		13.71	□□□□□ -0.22
CARM1-208	ENST00000590039	SLURP2	P0DP57	97 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	ADCYAP1R1	P41586	468 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	HMGCS2	P54868	508 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	MAP3K10	Q02779	954 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	RASGRF1	Q13972	1273 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	FERMT2	Q96AC1	680 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	KIF1BP	Q96EK5	621 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	TLR7	Q9NYK1	1049 aa	Known RBP	13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	MSRA	Q9UJ68	235 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	DBNL	Q9UJU6	430 aa	Known RBP	13.7	□□□□□ -0.22
CARM1-208	ENST00000590039		A0A0G2JMZ2	1700 aa		13.7	□□□□□ -0.22
CARM1-208	ENST00000590039	BRWD1	Q9NSI6	2320 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	ARID4A	P29374	1257 aa	Predicted RBP	13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	MAP2K5	Q13163	448 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	AAMP	Q13685	434 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	CSPP1	Q1MSJ5	1256 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	CCDC158	Q5M9N0	1113 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	TMEM240	Q5SV17	173 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	C16orf59	Q7L2K0	433 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	PLEKHH3	Q7Z736	793 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	SLC28A3	Q9HAS3	691 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	HMG20B	Q9P0W2	317 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	YBX2	Q9Y2T7	364 aa	Known RBP	13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	SUGT1	Q9Y2Z0	365 aa		13.69	□□□□□ -0.22
CARM1-208	ENST00000590039	UQCRFS1P1	P0C7P4	283 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms