RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 CHMP2AO43633 222 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 CAMTA2O94983 1202 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 SCG2P13521 617 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 PRKG1Q13976 671 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 ZNF397Q8NF99 534 aaPredicted RBP16.49■□□□□ 0.23
RETREG3-208ENST00000589797 EXOSC10Q01780 885 aaKnown RBP16.49■□□□□ 0.23
RETREG3-208ENST00000589797 ZNF34Q8IZ26 560 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 CACTINQ8WUQ7 758 aaKnown RBP16.49■□□□□ 0.23
RETREG3-208ENST00000589797 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
RETREG3-208ENST00000589797 MST1RQ04912 1400 aa16.49■□□□□ 0.23
RETREG3-208ENST00000589797 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 H0YIN7 160 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 TECP42680 631 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 PDE4DQ08499 809 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 PRIMPOLQ96LW4 560 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 AKR1B10O60218 316 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 CPXCR1Q8N123 301 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 IGSF22Q8N9C0 903 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 SYMPKQ92797 1274 aaKnown RBP16.48■□□□□ 0.23
RETREG3-208ENST00000589797 IFNAR1P17181 557 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 IBSPP21815 317 aaPredicted RBP16.48■□□□□ 0.23
RETREG3-208ENST00000589797 USP8P40818 1118 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
RETREG3-208ENST00000589797 NARFQ9UHQ1 456 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 GUCA1BQ9UMX6 200 aa16.48■□□□□ 0.23
RETREG3-208ENST00000589797 PTF1AQ7RTS3 328 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 TSG101Q99816 390 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 DESI2Q9BSY9 194 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 TRPC5Q9UL62 973 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-208ENST00000589797 KDM4FA0A1W2PPD8 638 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 SPDYE3A6NKU9 549 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 CTDNEP1O95476 244 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 NFIXQ14938 502 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 MAEAQ7L5Y9 396 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 BLIDQ8IZY5 108 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 PUF60Q9UHX1 559 aaKnown RBP16.47■□□□□ 0.23
RETREG3-208ENST00000589797 ANTXR2P58335 489 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 BAG1Q99933 345 aaPredicted RBP16.47■□□□□ 0.23
RETREG3-208ENST00000589797 GJA3Q9Y6H8 435 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 XDHP47989 1333 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 CDHR2Q9BYE9 1310 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 CASP7P55210 303 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 CLEC17AQ6ZS10 378 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 CENPHQ9H3R5 247 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 LY9Q9HBG7 655 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
RETREG3-208ENST00000589797 NKX1-1Q15270 411 aaPredicted RBP16.46■□□□□ 0.23
RETREG3-208ENST00000589797 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
RETREG3-208ENST00000589797 RMND1Q9NWS8 449 aa16.46■□□□□ 0.23
RETREG3-208ENST00000589797 CLRN2A0PK11 232 aa16.46■□□□□ 0.23
RETREG3-208ENST00000589797 FAM205CA6NFA0 338 aa16.46■□□□□ 0.23
RETREG3-208ENST00000589797 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
RETREG3-208ENST00000589797 TMCO3Q6UWJ1 677 aa16.46■□□□□ 0.23
RETREG3-208ENST00000589797 JADE2Q9NQC1 790 aa16.46■□□□□ 0.23
RETREG3-208ENST00000589797 POLR3EQ9NVU0 708 aa16.46■□□□□ 0.23
RETREG3-208ENST00000589797 AFF2P51816 1311 aa16.46■□□□□ 0.22
RETREG3-208ENST00000589797 FOXN1O15353 648 aa16.46■□□□□ 0.22
RETREG3-208ENST00000589797 AXDND1Q5T1B0 1012 aaPredicted RBP16.46■□□□□ 0.22
RETREG3-208ENST00000589797 RUFY1Q96T51 708 aa16.46■□□□□ 0.22
RETREG3-208ENST00000589797 ARHGAP23Q9P227 1491 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 MMP1P03956 469 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 NONOQ15233 471 aaKnown RBP eCLIP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 INTS5Q6P9B9 1019 aaKnown RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 CCDC102AQ96A19 550 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 COA7Q96BR5 231 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 MMP10P09238 476 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 LIFRP42702 1097 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 TTLL12Q14166 644 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 KCTD1Q719H9 257 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
RETREG3-208ENST00000589797 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 DCP1AQ9NPI6 582 aaPredicted RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 THRAP3Q9Y2W1 955 aaKnown RBP16.45■□□□□ 0.22
RETREG3-208ENST00000589797 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 SYCP1Q15431 976 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 TSGA10IPQ3SY00 556 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
RETREG3-208ENST00000589797 CFBP00751 764 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 ZNF569Q5MCW4 686 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 NELFCDQ8IXH7 590 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 TEKT1Q969V4 418 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms