RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 DDX23Q9BUQ8 820 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 SYNCQ9H7C4 482 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 FRMD3A2A2Y4 597 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 RPSAP08865 295 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 TROVE2P10155 538 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 GPTP24298 496 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 SLC35F6Q8N357 371 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 DCAF17Q5H9S7 520 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 SEPT14Q6ZU15 432 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 DSCC1Q9BVC3 393 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 TXNDC16Q9P2K2 825 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 PZPP20742 1482 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 ERCC3P19447 782 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 IRX5P78411 483 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 CASP8Q14790 479 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 RASIP1Q5U651 963 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 KBTBD3Q8NAB2 608 aa16.21■□□□□ 0.19
SMARCA4-214ENST00000589677 EIF3CLB5ME19 914 aaKnown RBP16.21■□□□□ 0.18
SMARCA4-214ENST00000589677 EIF3CQ99613 913 aaKnown RBP16.21■□□□□ 0.18
SMARCA4-214ENST00000589677 OSBPL3Q9H4L5 887 aa16.21■□□□□ 0.18
SMARCA4-214ENST00000589677 VCX3AQ9NNX9 186 aa16.21■□□□□ 0.18
SMARCA4-214ENST00000589677 ANKIB1Q9P2G1 1089 aa16.21■□□□□ 0.18
SMARCA4-214ENST00000589677 ASIC3Q9UHC3 531 aa16.21■□□□□ 0.18
SMARCA4-214ENST00000589677 BCAP29Q9UHQ4 241 aa16.21■□□□□ 0.18
SMARCA4-214ENST00000589677 CCDC169A6NNP5 214 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 CHUKO15111 745 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 SAMM50Q9Y512 469 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 CLEC17AQ6ZS10 378 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 PPIP5K1Q6PFW1 1433 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 SUN1O94901 812 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 NDUFA8P51970 172 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 ALS2CLQ60I27 953 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 SARM1Q6SZW1 724 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 C2CD5Q86YS7 1000 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 MAIP1Q8WWC4 291 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 RTEL1Q9NZ71 1219 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 TPX2Q9ULW0 747 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 TXNDC9O14530 226 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 HOXB7P09629 217 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 MORC3Q14149 939 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 SDCCAG8Q86SQ7 713 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 TCHPQ9BT92 498 aa16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCA4-214ENST00000589677 B4E1Z4 1266 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 SLMAPQ14BN4 828 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 E2F5Q15329 346 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 H7C1D1 291 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 FOXO3O43524 673 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 GBP7Q8N8V2 638 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 APPBP2Q92624 585 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 KIFAP3Q92845 792 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 I3L4J1 428 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 RRAGAQ7L523 313 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 TRPC3Q13507 836 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 CCDC105Q8IYK2 499 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 FRMD4BQ9Y2L6 1034 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 FLT4P35916 1363 aa16.19■□□□□ 0.18
SMARCA4-214ENST00000589677 EVI5O60447 810 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 TTC19Q6DKK2 380 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 CCHCR1Q8TD31 782 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 USP19O94966 1318 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 CALUO43852 315 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 KRT15P19012 456 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 UAP1Q16222 522 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 PIK3AP1Q6ZUJ8 805 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 AMFRQ9UKV5 643 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 RFC1P35251 1148 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 CCDC152Q4G0S7 254 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 ANKRD42Q8N9B4 389 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 E7EWF7 191 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 KMT5BQ4FZB7 885 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 HSP90AA5PQ58FG0 334 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 KCTD16Q68DU8 428 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 IMPG2Q9BZV3 1241 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 Q9H521 79 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 STAP2Q9UGK3 403 aa16.18■□□□□ 0.18
SMARCA4-214ENST00000589677 KRIT1O00522 736 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 GUCY2CP25092 1073 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 MGARPQ8TDB4 240 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 P3H4Q92791 437 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 PFDN1O60925 122 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 PTH1RQ03431 593 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 CCDC14Q49A88 953 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 CC2D1AQ6P1N0 951 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 MAGEB6Q8N7X4 407 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 NUF2Q9BZD4 464 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 SUDS3Q9H7L9 328 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 COMMD10Q9Y6G5 202 aa16.17■□□□□ 0.18
SMARCA4-214ENST00000589677 HLA-DOAP06340 250 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms