RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 CAP2P40123 477 aa11.85□□□□□ -0.51
TREM1-204ENST00000589614 PUM3Q15397 648 aaKnown RBP11.85□□□□□ -0.51
TREM1-204ENST00000589614 AAK1Q2M2I8 961 aa11.85□□□□□ -0.51
TREM1-204ENST00000589614 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
TREM1-204ENST00000589614 GJC2Q5T442 439 aaPredicted RBP11.85□□□□□ -0.51
TREM1-204ENST00000589614 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
TREM1-204ENST00000589614 SLC24A3Q9HC58 644 aa11.85□□□□□ -0.51
TREM1-204ENST00000589614 C9orf78Q9NZ63 289 aaPredicted RBP11.85□□□□□ -0.51
TREM1-204ENST00000589614 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
TREM1-204ENST00000589614 APAF1O14727 1248 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 KIAA0355O15063 1070 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 GPR37L1O60883 481 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 ZMYND10O75800 440 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 ITGB8P26012 769 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 BACE1P56817 501 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 FPGSQ05932 587 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 Q3C1V9 767 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 NECAB3Q96P71 396 aaPredicted RBP11.84□□□□□ -0.51
TREM1-204ENST00000589614 WDR18Q9BV38 432 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 PRDM12Q9H4Q4 367 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 EPHX3Q9H6B9 360 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.84□□□□□ -0.51
TREM1-204ENST00000589614 DDX4Q9NQI0 724 aaKnown RBP11.84□□□□□ -0.51
TREM1-204ENST00000589614 FLRT1Q9NZU1 646 aa11.84□□□□□ -0.51
TREM1-204ENST00000589614 PEX10O60683 326 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 IGHA2P01877 340 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 CYBAP13498 195 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 RAG1P15918 1043 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 TLE2Q04725 743 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 ADGRE1Q14246 886 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 TSR2Q969E8 191 aaKnown RBP11.83□□□□□ -0.52
TREM1-204ENST00000589614 KAZALD1Q96I82 304 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
TREM1-204ENST00000589614 SLC15A5A6NIM6 579 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 CLTBP09497 229 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 ATP2B2Q01814 1243 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 CCDC85BQ15834 202 aaPredicted RBP11.82□□□□□ -0.52
TREM1-204ENST00000589614 RABL6Q3YEC7 729 aaPredicted RBP11.82□□□□□ -0.52
TREM1-204ENST00000589614 TRPV1Q8NER1 839 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 LPIN2Q92539 896 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
TREM1-204ENST00000589614 PBX4Q9BYU1 374 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
TREM1-204ENST00000589614 GBF1Q92538 1859 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
TREM1-204ENST00000589614 ZNF236Q9UL36 1845 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 PRRC2BQ5JSZ5 2229 aaKnown RBP11.81□□□□□ -0.52
TREM1-204ENST00000589614 F6X3S4 739 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 SEPT4O43236 478 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 ALDH1L1O75891 902 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 SLC5A1P13866 664 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 PTPREP23469 700 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 CYP2C19P33261 490 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 ADCYAP1R1P41586 468 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 CCNA1P78396 465 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 PICALMQ13492 652 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 MTMR2Q13614 643 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 ZGPATQ8N5A5 531 aaKnown RBP11.81□□□□□ -0.52
TREM1-204ENST00000589614 SUCLG2Q96I99 432 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 PAGR1Q9BTK6 254 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 USP34Q70CQ2 3546 aa11.81□□□□□ -0.52
TREM1-204ENST00000589614 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
TREM1-204ENST00000589614 MRE11P49959 708 aa11.8□□□□□ -0.52
TREM1-204ENST00000589614 GRB14Q14449 540 aa11.8□□□□□ -0.52
TREM1-204ENST00000589614 RASIP1Q5U651 963 aa11.8□□□□□ -0.52
TREM1-204ENST00000589614 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
TREM1-204ENST00000589614 C11orf16Q9NQ32 467 aa11.8□□□□□ -0.52
TREM1-204ENST00000589614 GNL3LQ9NVN8 582 aaKnown RBP11.8□□□□□ -0.52
TREM1-204ENST00000589614 HERC5Q9UII4 1024 aaKnown RBP11.8□□□□□ -0.52
TREM1-204ENST00000589614 BRWD1Q9NSI6 2320 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 USP17L10C9JJH3 530 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 ERC2O15083 957 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 MAP4K4O95819 1239 aaPredicted RBP11.79□□□□□ -0.52
TREM1-204ENST00000589614 ASNSP08243 561 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 IGFBP4P22692 258 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 PBX2P40425 430 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
TREM1-204ENST00000589614 LRRC41Q15345 812 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 RAB30Q15771 203 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 OLFML2BQ68BL8 750 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 CCDC129Q6ZRS4 1044 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 FERMT2Q96AC1 680 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
TREM1-204ENST00000589614 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
TREM1-204ENST00000589614 DENND2AQ9ULE3 1009 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 IVNS1ABPQ9Y6Y0 642 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 LRRC37A2A6NM11 1700 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 SIPA1L1O43166 1804 aa11.79□□□□□ -0.52
TREM1-204ENST00000589614 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
TREM1-204ENST00000589614 BTDP43251 543 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 KCNQ1P51787 676 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 RHBDL3P58872 404 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 TFF2Q03403 129 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
TREM1-204ENST00000589614 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms