RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 GUCY1A2P33402 732 aa26.55■■□□□ 1.84
R3HDM4-205ENST00000589445 TFAP4Q01664 338 aa26.55■■□□□ 1.84
R3HDM4-205ENST00000589445 KIF23Q02241 960 aaPredicted RBP26.55■■□□□ 1.84
R3HDM4-205ENST00000589445 CREB3L3Q68CJ9 461 aa26.55■■□□□ 1.84
R3HDM4-205ENST00000589445 ZNF280CQ8ND82 737 aa26.55■■□□□ 1.84
R3HDM4-205ENST00000589445 ZIC5Q96T25 663 aa26.55■■□□□ 1.84
R3HDM4-205ENST00000589445 TAF6LQ9Y6J9 622 aa26.55■■□□□ 1.84
R3HDM4-205ENST00000589445 SPP2Q13103 211 aa26.54■■□□□ 1.84
R3HDM4-205ENST00000589445 SNAPC2Q13487 334 aa26.54■■□□□ 1.84
R3HDM4-205ENST00000589445 MTMR2Q13614 643 aa26.54■■□□□ 1.84
R3HDM4-205ENST00000589445 ZYXQ15942 572 aaKnown RBP26.54■■□□□ 1.84
R3HDM4-205ENST00000589445 RNF20Q5VTR2 975 aa26.54■■□□□ 1.84
R3HDM4-205ENST00000589445 TBC1D2Q9BYX2 928 aa26.54■■□□□ 1.84
R3HDM4-205ENST00000589445 CCL15-CCL14A0A0B4J2E2 113 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 MANSC4A6NHS7 340 aaPredicted RBP26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 B4E1Z4 1266 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 GTF2A2P52657 109 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 TRDNQ13061 729 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 CCL15Q16663 113 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 RALYLQ86SE5 291 aaKnown RBP26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 ESR2Q92731 530 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 CNNM2Q9H8M5 875 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 AFG3L2Q9Y4W6 797 aa26.53■■□□□ 1.84
R3HDM4-205ENST00000589445 MAP2K1Q02750 393 aaPredicted RBP26.52■■□□□ 1.84
R3HDM4-205ENST00000589445 SREBF2Q12772 1141 aa26.52■■□□□ 1.84
R3HDM4-205ENST00000589445 GADL1Q6ZQY3 521 aa26.52■■□□□ 1.84
R3HDM4-205ENST00000589445 KRT23Q9C075 422 aa26.52■■□□□ 1.84
R3HDM4-205ENST00000589445 ARHGEF10LQ9HCE6 1279 aa26.52■■□□□ 1.84
R3HDM4-205ENST00000589445 KCNH4Q9UQ05 1017 aa26.52■■□□□ 1.84
R3HDM4-205ENST00000589445 CCDC85CA6NKD9 419 aa26.51■■□□□ 1.83
R3HDM4-205ENST00000589445 E7EWF7 191 aa26.51■■□□□ 1.83
R3HDM4-205ENST00000589445 KDM4AO75164 1064 aa26.51■■□□□ 1.83
R3HDM4-205ENST00000589445 FGRP09769 529 aa26.51■■□□□ 1.83
R3HDM4-205ENST00000589445 C8orf34Q49A92 452 aa26.51■■□□□ 1.83
R3HDM4-205ENST00000589445 NEDD1Q8NHV4 660 aa26.51■■□□□ 1.83
R3HDM4-205ENST00000589445 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.51■■□□□ 1.83
R3HDM4-205ENST00000589445 CETPP11597 493 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 HMGCS2P54868 508 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 DGKZQ13574 1117 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 NECTIN1Q15223 517 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 STOX1Q6ZVD7 989 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 ACER1Q8TDN7 264 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 CEP95Q96GE4 821 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 WDR18Q9BV38 432 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 KANSL2Q9H9L4 492 aa26.5■■□□□ 1.83
R3HDM4-205ENST00000589445 NMT2O60551 498 aa26.49■■□□□ 1.83
R3HDM4-205ENST00000589445 ZKSCAN1P17029 563 aaPredicted RBP26.49■■□□□ 1.83
R3HDM4-205ENST00000589445 MCCP23508 829 aa26.49■■□□□ 1.83
R3HDM4-205ENST00000589445 MAP2K2P36507 400 aa26.49■■□□□ 1.83
R3HDM4-205ENST00000589445 BRI3BPQ8WY22 251 aa26.49■■□□□ 1.83
R3HDM4-205ENST00000589445 SH2D4AQ9H788 454 aa26.49■■□□□ 1.83
R3HDM4-205ENST00000589445 A0A0G2JLL6 359 aaPredicted RBP26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 USP17L10C9JJH3 530 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 CXCL11O14625 94 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 RAD21O60216 631 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 EIF5BO60841 1220 aaKnown RBP26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 EEF2P13639 858 aaKnown RBP26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 PRRT2Q7Z6L0 340 aaPredicted RBP26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 NCOA7Q8NI08 942 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 NKX2-3Q8TAU0 364 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 MS4A4AQ96JQ5 239 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 ZKSCAN3Q9BRR0 538 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 TMOD4Q9NZQ9 345 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 STX8Q9UNK0 236 aa26.48■■□□□ 1.83
R3HDM4-205ENST00000589445 IGKV6D-41A0A0C4DH26 115 aa26.47■■□□□ 1.83
R3HDM4-205ENST00000589445 RGS19P49795 217 aa26.47■■□□□ 1.83
R3HDM4-205ENST00000589445 LRRC47Q8N1G4 583 aaKnown RBP26.47■■□□□ 1.83
R3HDM4-205ENST00000589445 HSPA4P34932 840 aa26.46■■□□□ 1.83
R3HDM4-205ENST00000589445 BACE1P56817 501 aa26.46■■□□□ 1.83
R3HDM4-205ENST00000589445 IQCA1Q86XH1 822 aa26.46■■□□□ 1.83
R3HDM4-205ENST00000589445 UBAC1Q9BSL1 405 aa26.46■■□□□ 1.83
R3HDM4-205ENST00000589445 MTMR4Q9NYA4 1195 aa26.46■■□□□ 1.83
R3HDM4-205ENST00000589445 A0A1W2PRG0 241 aa26.45■■□□□ 1.82
R3HDM4-205ENST00000589445 TTLL1O95922 423 aa26.45■■□□□ 1.82
R3HDM4-205ENST00000589445 KIAA1683Q9H0B3 1180 aa26.45■■□□□ 1.82
R3HDM4-205ENST00000589445 CLIP2Q9UDT6 1046 aa26.45■■□□□ 1.82
R3HDM4-205ENST00000589445 IGF2BP3O00425 579 aaKnown RBP eCLIP26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 SEC24BO95487 1268 aa26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 NT5C2P49902 561 aa26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 USP14P54578 494 aa26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 PPP4R3BQ5MIZ7 849 aa26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 USP17L2Q6R6M4 530 aa26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 REM2Q8IYK8 340 aaPredicted RBP26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 RASEFQ8IZ41 740 aa26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 USP26Q9BXU7 913 aa26.44■■□□□ 1.82
R3HDM4-205ENST00000589445 C19orf81C9J6K1 198 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 EPB41L2O43491 1005 aaKnown RBP26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 KRT32Q14532 448 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 CYB5R4Q7L1T6 521 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 FASTKD5Q7L8L6 764 aaKnown RBP26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 IFNL1Q8IU54 200 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 GOPCQ9HD26 462 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 IL17RBQ9NRM6 502 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 ZSWIM5Q9P217 1185 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 NYAP2Q9P242 653 aa26.43■■□□□ 1.82
R3HDM4-205ENST00000589445 TNKSO95271 1327 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 BTBD19C9JJ37 291 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 INHBEP58166 350 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 TREML2Q5T2D2 321 aa26.42■■□□□ 1.82
R3HDM4-205ENST00000589445 CHST3Q7LGC8 479 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms