RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 RRP1BQ14684 758 aaKnown RBP12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 RAB3GAP1Q15042 981 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 ABCB5Q2M3G0 1257 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 KBTBD3Q8NAB2 608 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 RAET1EQ8TD07 263 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
CLPTM1-211ENST00000589347 PRUNE2Q8WUY3 3088 aa12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 ARPP21Q9UBL0 812 aaPredicted RBP12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 SRRDQ9UH36 339 aa12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
CLPTM1-211ENST00000589347 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 MX1P20591 662 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 CTGFP29279 349 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 SHMT1P34896 483 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 PLCD1P51178 756 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 APPBP2Q92624 585 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 COA7Q96BR5 231 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 MUC3AQ02505 3323 aa12.72□□□□□ -0.37
CLPTM1-211ENST00000589347 RNF113AO15541 343 aaKnown RBP12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 FARP2O94887 1054 aaPredicted RBP12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 CCL5P13501 91 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 GNAT2P19087 354 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 GRK4P32298 578 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 UBXN2AP68543 259 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 GABPAQ06546 454 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 ANKRD13CQ8N6S4 541 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 C12orf42Q96LP6 360 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 ASCC2Q9H1I8 757 aaPredicted RBP12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 SH2D4AQ9H788 454 aa12.71□□□□□ -0.37
CLPTM1-211ENST00000589347 TTC28Q96AY4 2481 aa12.7□□□□□ -0.38
CLPTM1-211ENST00000589347 TMEM179Q6ZVK1 233 aa12.7□□□□□ -0.38
CLPTM1-211ENST00000589347 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
CLPTM1-211ENST00000589347 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
CLPTM1-211ENST00000589347 RLFQ13129 1914 aa12.7□□□□□ -0.38
CLPTM1-211ENST00000589347 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 ZNFX1Q9P2E3 1918 aaKnown RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 GPAA1O43292 621 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 PRKAB2O43741 272 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 BMP8BP34820 402 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 HERVK_113P62684 666 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 PRKCZQ05513 592 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 CCAR1Q8IX12 1150 aaKnown RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 DEFB123Q8N688 67 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 PI4K2BQ8TCG2 481 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 U2AF1L4Q8WU68 220 aaKnown RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 CCDC17Q96LX7 622 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 GDF15Q99988 308 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 KIAA1683Q9H0B3 1180 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 PUS7LQ9H0K6 701 aaKnown RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
CLPTM1-211ENST00000589347 PLXNA1Q9UIW2 1896 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L15C9J2P7 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L13C9JLJ4 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L11C9JVI0 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L18D6R9N7 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L22D6RA61 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L17D6RBQ6 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L19D6RCP7 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L20D6RJB6 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 CYP2D6P10635 497 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 TDO2P48775 406 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 JAG1P78504 1218 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 ICA1Q05084 483 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L24Q0WX57 530 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 SEPT2Q15019 361 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 SLFNL1Q499Z3 407 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 C16orf86Q6ZW13 317 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 RNF208Q9H0X6 261 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 MORF4L1Q9UBU8 362 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 BIN2Q9UBW5 565 aaPredicted RBP12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 STAP2Q9UGK3 403 aa12.68□□□□□ -0.38
CLPTM1-211ENST00000589347 USP17L12C9JPN9 530 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 369.1 ms