RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 AKAP17AQ02040 695 aaKnown RBP8.52□□□□□ -1.05
ZNF540-206ENST00000589117 ANKRD18AQ8IVF6 992 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 ESR2Q92731 530 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 KCNF1Q9H3M0 494 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 ZMIZ1Q9ULJ6 1067 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 CEP131Q9UPN4 1083 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 PAXBP1Q9Y5B6 917 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 NUP98P52948 1817 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 MYO1BO43795 1136 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 CUTAO60888 179 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 ATG7O95352 703 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 FMNL1O95466 1100 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-206ENST00000589117 POTEIP0CG38 1075 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 NLRP12P59046 1061 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 CHRNDQ07001 517 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 MTMR2Q13614 643 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 UBE4AQ14139 1066 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 GPR153Q6NV75 609 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 TMED8Q6PL24 325 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-206ENST00000589117 C11orf57Q6ZUT1 292 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-206ENST00000589117 SLC26A6Q9BXS9 759 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 ARMT1Q9H993 441 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 PLCH1Q4KWH8 1693 aa8.52□□□□□ -1.05
ZNF540-206ENST00000589117 GSG1L2A8MUP6 293 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 DEXIO95424 95 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 C7P10643 843 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 PFKFB1P16118 471 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 CYP7A1P22680 504 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 BCAMP50895 628 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 RTN1Q16799 776 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 RILPL1Q5EBL4 403 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 RRP12Q5JTH9 1297 aaKnown RBP8.51□□□□□ -1.05
ZNF540-206ENST00000589117 PHLDB3Q6NSJ2 640 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 OLFM4Q6UX06 510 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 RAB11FIP4Q86YS3 637 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 LRRC8AQ8IWT6 810 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 DHX40Q8IX18 779 aaKnown RBP8.51□□□□□ -1.05
ZNF540-206ENST00000589117 AOPEPQ8N6M6 819 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 SEC31BQ9NQW1 1179 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 DENND2AQ9ULE3 1009 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 PYCARDQ9ULZ3 195 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 AKAP11Q9UKA4 1901 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 MYH15Q9Y2K3 1946 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 NEDD4P46934 1319 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 IKBKBO14920 756 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 NTSR2O95665 410 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 NTRK3Q16288 839 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 TPD52L1Q16890 204 aaPredicted RBP8.51□□□□□ -1.05
ZNF540-206ENST00000589117 NOSTRINQ8IVI9 506 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 ELOA2Q8IYF1 753 aaPredicted RBP8.51□□□□□ -1.05
ZNF540-206ENST00000589117 PHKBQ93100 1093 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 ACSBG1Q96GR2 724 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 FOXP1Q9H334 677 aaPredicted RBP8.51□□□□□ -1.05
ZNF540-206ENST00000589117 BCL2L12Q9HB09 334 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 BSDC1Q9NW68 430 aaPredicted RBP8.51□□□□□ -1.05
ZNF540-206ENST00000589117 RAI14Q9P0K7 980 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 ABCF2Q9UG63 623 aa8.51□□□□□ -1.05
ZNF540-206ENST00000589117 NWD2Q9ULI1 1742 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 KIF2AO00139 706 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-206ENST00000589117 CBFA2T2O43439 604 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 ADAMTS2O95450 1211 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 CALM1P0DP23 149 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 CALM2P0DP24 149 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 CALM3P0DP25 149 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 MARCKSP29966 332 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-206ENST00000589117 CDC27P30260 824 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 RBM10P98175 930 aaKnown RBP8.5□□□□□ -1.05
ZNF540-206ENST00000589117 AXDND1Q5T1B0 1012 aaPredicted RBP8.5□□□□□ -1.05
ZNF540-206ENST00000589117 KANK3Q6NY19 840 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 IQCA1Q86XH1 822 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 CCDC144CPQ8IYA2 1237 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 NYXQ9GZU5 481 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 NRBP1Q9UHY1 535 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 NID2Q14112 1375 aa8.5□□□□□ -1.05
ZNF540-206ENST00000589117 KIF28PB7ZC32 967 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 MMP1P03956 469 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 SKILP12757 684 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 RXRAP19793 462 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 PPARAQ07869 468 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 SF3B3Q15393 1217 aaKnown RBP8.49□□□□□ -1.05
ZNF540-206ENST00000589117 TMEM164Q5U3C3 297 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 C17orf53Q8N3J3 647 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-206ENST00000589117 FANCBQ8NB91 859 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 CNNM3Q8NE01 707 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 EPB41L4AQ9HCS5 686 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-206ENST00000589117 BRMS1Q9HCU9 246 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 ANAPC4Q9UJX5 808 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 LRP5O75197 1615 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 COL22A1Q8NFW1 1626 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-206ENST00000589117 FAM237AA0A1B0GTK4 181 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 PPP1R3GB7ZBB8 358 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 CCP110O43303 1012 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 BMP15O95972 392 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 TUBB4AP04350 444 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 NT5C2P49902 561 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 RESP18Q5W5W9 173 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 FILIP1Q7Z7B0 1213 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms