RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 SPP2Q13103 211 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 KRT32Q14532 448 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 KCNB2Q92953 911 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDK3-204ENST00000588812 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.12□□□□□ -0.31
CDK3-204ENST00000588812 KCNH4Q9UQ05 1017 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 TAF6LQ9Y6J9 622 aa13.12□□□□□ -0.31
CDK3-204ENST00000588812 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
CDK3-204ENST00000588812 TRIM75PA6NK02 468 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 B4E1Z4 1266 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 USP17L10C9JJH3 530 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 SEC24BO95487 1268 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 MAP2K2P36507 400 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 INHBEP58166 350 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
CDK3-204ENST00000588812 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
CDK3-204ENST00000588812 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 ARHGEF10LQ9HCE6 1279 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 MTMR4Q9NYA4 1195 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
CDK3-204ENST00000588812 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 TTLL1O95922 423 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 CETPP11597 493 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 USP14P54578 494 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 BACE1P56817 501 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
CDK3-204ENST00000588812 STOX1Q6ZVD7 989 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 TTC14Q96N46 770 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 FEZ1Q99689 392 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
CDK3-204ENST00000588812 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 SNX14Q9Y5W7 946 aa13.1□□□□□ -0.31
CDK3-204ENST00000588812 A0A0G2JLL6 359 aaPredicted RBP13.09□□□□□ -0.31
CDK3-204ENST00000588812 AOC2O75106 756 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
CDK3-204ENST00000588812 EEF2P13639 858 aaKnown RBP13.09□□□□□ -0.31
CDK3-204ENST00000588812 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
CDK3-204ENST00000588812 SART3Q15020 963 aaKnown RBP13.09□□□□□ -0.31
CDK3-204ENST00000588812 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 FASTKD5Q7L8L6 764 aaKnown RBP13.09□□□□□ -0.31
CDK3-204ENST00000588812 PRRT2Q7Z6L0 340 aaPredicted RBP13.09□□□□□ -0.31
CDK3-204ENST00000588812 SIAH1Q8IUQ4 282 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 MKL1Q969V6 931 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 UBAC1Q9BSL1 405 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 IL17RBQ9NRM6 502 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 SYNPO2Q9UMS6 1093 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 TMX2Q9Y320 296 aa13.09□□□□□ -0.31
CDK3-204ENST00000588812 GREB1LQ9C091 1923 aaPredicted RBP13.08□□□□□ -0.32
CDK3-204ENST00000588812 CCL15-CCL14A0A0B4J2E2 113 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
CDK3-204ENST00000588812 NMT2O60551 498 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 PSMA5P28066 241 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 MCM5P33992 734 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 NOVP48745 357 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 ANAPC15P60006 121 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 MTMR2Q13614 643 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 CCL15Q16663 113 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 SH3D19Q5HYK7 790 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 DGKHQ86XP1 1220 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 CLEC10AQ8IUN9 316 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 MB21D2Q8IYB1 491 aaPredicted RBP13.08□□□□□ -0.32
CDK3-204ENST00000588812 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
CDK3-204ENST00000588812 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
CDK3-204ENST00000588812 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
CDK3-204ENST00000588812 PHIPQ8WWQ0 1821 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 ERICH2A1L162 156 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 TM4SF4P48230 202 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 HMGCS2P54868 508 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 NKX2-3Q8TAU0 364 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 BRI3BPQ8WY22 251 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 ANKS1AQ92625 1134 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
CDK3-204ENST00000588812 ZIC5Q96T25 663 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
CDK3-204ENST00000588812 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
CDK3-204ENST00000588812 PRC1O43663 620 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms