RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 SREBF2Q12772 1141 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 DLGAP5Q15398 846 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 CFAP100Q494V2 611 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 NBPF12Q5TAG4 269 aaPredicted RBP7.12□□□□□ -1.27
CHUK-203ENST00000588656 STRIP1Q5VSL9 837 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 RNF20Q5VTR2 975 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 KSR2Q6VAB6 950 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 OTOP1Q7RTM1 612 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 APOBEC3FQ8IUX4 373 aaKnown RBP7.12□□□□□ -1.27
CHUK-203ENST00000588656 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 WNK4Q96J92 1243 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 MPHOSPH8Q99549 860 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 COA1Q9GZY4 146 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 DEFB129Q9H1M3 183 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 ELP3Q9H9T3 547 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 CYLDQ9NQC7 956 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 TRIOBPQ9H2D6 2365 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 CACNB3P54284 484 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 CRHR2Q13324 411 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 FKBP5Q13451 457 aaPredicted RBP7.11□□□□□ -1.27
CHUK-203ENST00000588656 PKN2Q16513 984 aaKnown RBP7.11□□□□□ -1.27
CHUK-203ENST00000588656 TWISTNBQ3B726 338 aaPredicted RBP7.11□□□□□ -1.27
CHUK-203ENST00000588656 EPHA10Q5JZY3 1008 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 FOXR1Q6PIV2 292 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 PRICKLE2Q7Z3G6 844 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 WHAMMQ8TF30 809 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 PRMT6Q96LA8 375 aaPredicted RBP7.11□□□□□ -1.27
CHUK-203ENST00000588656 STK31Q9BXU1 1019 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 CD209Q9NNX6 404 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 IQSEC3Q9UPP2 1182 aaPredicted RBP7.11□□□□□ -1.27
CHUK-203ENST00000588656 PCDHB9Q9Y5E1 797 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 DOCK3Q8IZD9 2030 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 ALPK3Q96L96 1907 aa7.11□□□□□ -1.27
CHUK-203ENST00000588656 MYO3BQ8WXR4 1341 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 IRS2Q9Y4H2 1338 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 TCP10L2B9ZVM9 353 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 H7C1W4 665 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 HSP90B1P14625 803 aaKnown RBP7.1□□□□□ -1.27
CHUK-203ENST00000588656 FLIIQ13045 1269 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 GCKRQ14397 625 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 GRIK5Q16478 980 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 LDLRAD1Q5T700 205 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 SCARF2Q96GP6 870 aaPredicted RBP7.1□□□□□ -1.27
CHUK-203ENST00000588656 ZBED3Q96IU2 234 aaPredicted RBP7.1□□□□□ -1.27
CHUK-203ENST00000588656 PTPN18Q99952 460 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 TDRD3Q9H7E2 651 aaKnown RBP7.1□□□□□ -1.27
CHUK-203ENST00000588656 PRKRIP1Q9H875 184 aaPredicted RBP7.1□□□□□ -1.27
CHUK-203ENST00000588656 LEMD3Q9Y2U8 911 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 DOCK2Q92608 1830 aa7.1□□□□□ -1.27
CHUK-203ENST00000588656 PTPRFP10586 1907 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 MYH2Q9UKX2 1941 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 SZT2Q5T011 3432 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 ANKRD18BA2A2Z9 1011 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 USP2O75604 605 aaPredicted RBP7.09□□□□□ -1.27
CHUK-203ENST00000588656 GYG1P46976 350 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 CASP7P55210 303 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 MAP3K10Q02779 954 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 RASA3Q14644 834 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 HABP4Q5JVS0 413 aaKnown RBP7.09□□□□□ -1.27
CHUK-203ENST00000588656 KANK3Q6NY19 840 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 TRIM22Q8IYM9 498 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 SH3TC2Q8TF17 1288 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 OPTNQ96CV9 577 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 PUS3Q9BZE2 481 aaKnown RBP7.09□□□□□ -1.27
CHUK-203ENST00000588656 ARHGAP39Q9C0H5 1083 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 TMEM39BQ9GZU3 492 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 ENAMQ9NRM1 1142 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 PTPN22Q9Y2R2 807 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 PTCH2Q9Y6C5 1203 aa7.09□□□□□ -1.27
CHUK-203ENST00000588656 COL1A1P02452 1464 aaPredicted RBP7.09□□□□□ -1.27
CHUK-203ENST00000588656 ATAD5Q96QE3 1844 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 A0A1W2PRU2 124 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 MANSC4A6NHS7 340 aaPredicted RBP7.08□□□□□ -1.28
CHUK-203ENST00000588656 PPP1R12BO60237 982 aaPredicted RBP7.08□□□□□ -1.28
CHUK-203ENST00000588656 FBXO45P0C2W1 286 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 FOXO4P98177 505 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 CHAF1AQ13111 956 aaPredicted RBP7.08□□□□□ -1.28
CHUK-203ENST00000588656 TAF7LQ5H9L4 462 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 LMBR1LQ6UX01 489 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 ZNF804AQ7Z570 1209 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 DNAAF4Q8WXU2 420 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 ANKRD2Q9GZV1 360 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 EFCC1Q9HA90 598 aa7.08□□□□□ -1.28
CHUK-203ENST00000588656 ZNF70Q9UC06 446 aaPredicted RBP7.08□□□□□ -1.28
CHUK-203ENST00000588656 FANCIQ9NVI1 1328 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 PHIPQ8WWQ0 1821 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 CCL15-CCL14A0A0B4J2E2 113 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 MEN1O00255 615 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 MYO1BO43795 1136 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 CSF1RP07333 972 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 RHOQP17081 205 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 IREB2P48200 963 aaKnown RBP7.07□□□□□ -1.28
CHUK-203ENST00000588656 ERVK-9P63128 1117 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 SP3Q02447 781 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 CALD1Q05682 793 aaKnown RBP7.07□□□□□ -1.28
CHUK-203ENST00000588656 EXOSC9Q06265 439 aaKnown RBP7.07□□□□□ -1.28
CHUK-203ENST00000588656 IFIT5Q13325 482 aaKnown RBP7.07□□□□□ -1.28
CHUK-203ENST00000588656 VGLL4Q14135 290 aa7.07□□□□□ -1.28
CHUK-203ENST00000588656 SUZ12Q15022 739 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms