RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TMX3Q96JJ7 454 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 WRNIP1Q96S55 665 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 LIMCH1Q9UPQ0 1083 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 MYH4Q9Y623 1939 aa26.54■■□□□ 1.84
ACTN4-210ENST00000588618 GH2P01242 217 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 YY1P25490 414 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 LIFRP42702 1097 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 TTLL12Q14166 644 aaPredicted RBP26.53■■□□□ 1.84
ACTN4-210ENST00000588618 ME3Q16798 604 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 CHADLQ6NUI6 762 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 PAPPA2Q9BXP8 1791 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 CTNND1O60716 968 aaKnown RBP26.53■■□□□ 1.84
ACTN4-210ENST00000588618 ASNSP08243 561 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 GUCY1A2P33402 732 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 EVCP57679 992 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 SYNE3Q6ZMZ3 975 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 DGKHQ86XP1 1220 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 CEP95Q96GE4 821 aa26.53■■□□□ 1.84
ACTN4-210ENST00000588618 ST3GAL1Q11201 340 aa26.52■■□□□ 1.84
ACTN4-210ENST00000588618 SGMS1Q86VZ5 419 aa26.52■■□□□ 1.84
ACTN4-210ENST00000588618 ZNF408Q9H9D4 720 aa26.52■■□□□ 1.84
ACTN4-210ENST00000588618 KANSL2Q9H9L4 492 aa26.52■■□□□ 1.84
ACTN4-210ENST00000588618 IREB2P48200 963 aaKnown RBP26.51■■□□□ 1.83
ACTN4-210ENST00000588618 NOVP48745 357 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 KLRG1Q96E93 195 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 ZBTB21Q9ULJ3 1066 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 OTOFQ9HC10 1997 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 TTLL1O95922 423 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 ATP2B2Q01814 1243 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 RAB11FIP4Q86YS3 637 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 KAT14Q9H8E8 782 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 GINM1Q9NU53 330 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 MTMR4Q9NYA4 1195 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 DAXXQ9UER7 740 aaPredicted RBP26.51■■□□□ 1.83
ACTN4-210ENST00000588618 SLC12A7Q9Y666 1083 aa26.51■■□□□ 1.83
ACTN4-210ENST00000588618 KLF18A0A0U1RQI7 1052 aa26.5■■□□□ 1.83
ACTN4-210ENST00000588618 TRAF5O00463 557 aa26.5■■□□□ 1.83
ACTN4-210ENST00000588618 ICA1Q05084 483 aa26.5■■□□□ 1.83
ACTN4-210ENST00000588618 SEPT2Q15019 361 aa26.5■■□□□ 1.83
ACTN4-210ENST00000588618 IPO9Q96P70 1041 aaKnown RBP26.5■■□□□ 1.83
ACTN4-210ENST00000588618 PICK1Q9NRD5 415 aa26.5■■□□□ 1.83
ACTN4-210ENST00000588618 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.5■■□□□ 1.83
ACTN4-210ENST00000588618 ZNF112Q9UJU3 913 aa26.5■■□□□ 1.83
ACTN4-210ENST00000588618 DOCK1Q14185 1865 aa26.5■■□□□ 1.83
ACTN4-210ENST00000588618 ARMC9Q7Z3E5 817 aa26.49■■□□□ 1.83
ACTN4-210ENST00000588618 ANKS1AQ92625 1134 aa26.49■■□□□ 1.83
ACTN4-210ENST00000588618 ZSCAN31Q96LW9 406 aaPredicted RBP26.49■■□□□ 1.83
ACTN4-210ENST00000588618 MYL10Q9BUA6 226 aa26.49■■□□□ 1.83
ACTN4-210ENST00000588618 HPS5Q9UPZ3 1129 aa26.49■■□□□ 1.83
ACTN4-210ENST00000588618 USP2O75604 605 aaPredicted RBP26.48■■□□□ 1.83
ACTN4-210ENST00000588618 PDIA3P30101 505 aaKnown RBP26.48■■□□□ 1.83
ACTN4-210ENST00000588618 INPP5BP32019 993 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 FMR1Q06787 632 aaKnown RBP eCLIP26.48■■□□□ 1.837e-7■■■□□ 16.1
ACTN4-210ENST00000588618 STK3Q13188 491 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 APOA5Q6Q788 366 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 CATIPQ7Z7H3 387 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 NECAB1Q8N987 351 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 SIAH1Q8IUQ4 282 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 SCYL3Q8IZE3 742 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 SH2B1Q9NRF2 756 aaPredicted RBP26.48■■□□□ 1.83
ACTN4-210ENST00000588618 CLIP2Q9UDT6 1046 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 CSADQ9Y600 493 aa26.48■■□□□ 1.83
ACTN4-210ENST00000588618 TOP1P11387 765 aaKnown RBP26.47■■□□□ 1.83
ACTN4-210ENST00000588618 RXRAP19793 462 aa26.47■■□□□ 1.83
ACTN4-210ENST00000588618 MAP3K9P80192 1104 aa26.47■■□□□ 1.83
ACTN4-210ENST00000588618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.47■■□□□ 1.83
ACTN4-210ENST00000588618 ZKSCAN4Q969J2 545 aaPredicted RBP26.47■■□□□ 1.83
ACTN4-210ENST00000588618 ZNF274Q96GC6 653 aaPredicted RBP26.47■■□□□ 1.83
ACTN4-210ENST00000588618 ARHGEF10LQ9HCE6 1279 aa26.47■■□□□ 1.83
ACTN4-210ENST00000588618 GOLGA8BA8MQT2 603 aa26.46■■□□□ 1.83
ACTN4-210ENST00000588618 KIF3CO14782 793 aa26.46■■□□□ 1.83
ACTN4-210ENST00000588618 TMEM47Q9BQJ4 181 aa26.46■■□□□ 1.83
ACTN4-210ENST00000588618 ZBTB43O43298 467 aa26.45■■□□□ 1.83
ACTN4-210ENST00000588618 DTNBO60941 627 aa26.45■■□□□ 1.83
ACTN4-210ENST00000588618 EEF2P13639 858 aaKnown RBP26.45■■□□□ 1.83
ACTN4-210ENST00000588618 CUL4AQ13619 759 aa26.45■■□□□ 1.83
ACTN4-210ENST00000588618 MICU3Q86XE3 530 aa26.45■■□□□ 1.83
ACTN4-210ENST00000588618 ZNF654Q8IZM8 581 aa26.45■■□□□ 1.83
ACTN4-210ENST00000588618 PNMA1Q8ND90 353 aa26.45■■□□□ 1.83
ACTN4-210ENST00000588618 SLKQ9H2G2 1235 aaPredicted RBP26.45■■□□□ 1.83
ACTN4-210ENST00000588618 NYAP2Q9P242 653 aa26.45■■□□□ 1.83
ACTN4-210ENST00000588618 HSP90AA1P07900 732 aaKnown RBP26.45■■□□□ 1.82
ACTN4-210ENST00000588618 SCRN1Q12765 414 aa26.45■■□□□ 1.82
ACTN4-210ENST00000588618 SMC1BQ8NDV3 1235 aa26.45■■□□□ 1.82
ACTN4-210ENST00000588618 NUP133Q8WUM0 1156 aa26.45■■□□□ 1.82
ACTN4-210ENST00000588618 NCOA5Q9HCD5 579 aaKnown RBP26.45■■□□□ 1.82
ACTN4-210ENST00000588618 PHIPQ8WWQ0 1821 aa26.44■■□□□ 1.82
ACTN4-210ENST00000588618 PFKFB2O60825 505 aa26.44■■□□□ 1.82
ACTN4-210ENST00000588618 CELF2O95319 508 aaKnown RBP26.44■■□□□ 1.82
ACTN4-210ENST00000588618 CCT2P78371 535 aaKnown RBP26.44■■□□□ 1.82
ACTN4-210ENST00000588618 TROAPQ12815 778 aa26.44■■□□□ 1.82
ACTN4-210ENST00000588618 RASGRP2Q7LDG7 609 aa26.44■■□□□ 1.82
ACTN4-210ENST00000588618 CCDC84Q86UT8 332 aaPredicted RBP26.44■■□□□ 1.82
ACTN4-210ENST00000588618 CCDC83Q8IWF9 413 aa26.44■■□□□ 1.82
ACTN4-210ENST00000588618 ANKRD13AQ8IZ07 590 aa26.44■■□□□ 1.82
ACTN4-210ENST00000588618 SH2D4AQ9H788 454 aa26.44■■□□□ 1.82
ACTN4-210ENST00000588618 USP17L5A8MUK1 530 aa26.43■■□□□ 1.82
ACTN4-210ENST00000588618 CALM1P0DP23 149 aa26.43■■□□□ 1.82
ACTN4-210ENST00000588618 CALM2P0DP24 149 aa26.43■■□□□ 1.82
ACTN4-210ENST00000588618 CALM3P0DP25 149 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 301.4 ms