RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TBC1D12O60347 775 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 GDF11O95390 407 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 MAP3K10Q02779 954 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
VMP1-207ENST00000588131 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 MICU3Q86XE3 530 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 DGKHQ86XP1 1220 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 ZNF654Q8IZM8 581 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 ANKS1AQ92625 1134 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 CEP95Q96GE4 821 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 INTS4Q96HW7 963 aaKnown RBP13.25□□□□□ -0.29
VMP1-207ENST00000588131 CCDC17Q96LX7 622 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
VMP1-207ENST00000588131 SLC12A7Q9Y666 1083 aa13.25□□□□□ -0.29
VMP1-207ENST00000588131 SSC5DA1L4H1 1573 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 NID2Q14112 1375 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 POLR2AP24928 1970 aaKnown RBP13.24□□□□□ -0.29
VMP1-207ENST00000588131 IQCA1LA6NCM1 817 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 ADM5C9JUS6 153 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 DDIT3P35638 169 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 NOVP48745 357 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 CCDC178Q5BJE1 867 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 CCDC144CPQ8IYA2 1237 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
VMP1-207ENST00000588131 GOLGA8AA7E2F4 631 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 CTDNEP1O95476 244 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 YY1P25490 414 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 CDC27P30260 824 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 GUCY1A2P33402 732 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 METAP2P50579 478 aaKnown RBP eCLIP13.23□□□□□ -0.29
VMP1-207ENST00000588131 ABCB5Q2M3G0 1257 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 EAPPQ56P03 285 aaPredicted RBP13.23□□□□□ -0.29
VMP1-207ENST00000588131 NUP133Q8WUM0 1156 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
VMP1-207ENST00000588131 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 FAM217BQ9NTX9 383 aaPredicted RBP13.23□□□□□ -0.29
VMP1-207ENST00000588131 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 PPP2R3BQ9Y5P8 575 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 ATAD5Q96QE3 1844 aa13.23□□□□□ -0.29
VMP1-207ENST00000588131 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 JAK2O60674 1132 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 DDAH1O94760 285 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 GH2P01242 217 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 TROAPQ12815 778 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 SEPT2Q15019 361 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 SYNE3Q6ZMZ3 975 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 TMEM179Q6ZVK1 233 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 PNMA1Q8ND90 353 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 NSUN7Q8NE18 718 aaKnown RBP13.22□□□□□ -0.29
VMP1-207ENST00000588131 KAT14Q9H8E8 782 aa13.22□□□□□ -0.29
VMP1-207ENST00000588131 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.22□□□□□ -0.29
VMP1-207ENST00000588131 MYH4Q9Y623 1939 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 PPFIA3O75145 1194 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
VMP1-207ENST00000588131 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
VMP1-207ENST00000588131 RCAN1P53805 252 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 RTN1Q16799 776 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 RASGRP2Q7LDG7 609 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 SIAH1Q8IUQ4 282 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 LRRC47Q8N1G4 583 aaKnown RBP13.21□□□□□ -0.29
VMP1-207ENST00000588131 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
VMP1-207ENST00000588131 RRAGCQ9HB90 399 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.21□□□□□ -0.29
VMP1-207ENST00000588131 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 ZBTB21Q9ULJ3 1066 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 FZD1Q9UP38 647 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
VMP1-207ENST00000588131 PAPPA2Q9BXP8 1791 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 TTLL1O95922 423 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 EEF2P13639 858 aaKnown RBP13.2□□□□□ -0.3
VMP1-207ENST00000588131 GJB2P29033 226 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 CAP2P40123 477 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 KRT26Q7Z3Y9 468 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 USP48Q86UV5 1035 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 PNMA8AQ86V59 439 aaPredicted RBP13.2□□□□□ -0.3
VMP1-207ENST00000588131 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
VMP1-207ENST00000588131 ZNF341Q9BYN7 854 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
VMP1-207ENST00000588131 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 DOCK1Q14185 1865 aa13.2□□□□□ -0.3
VMP1-207ENST00000588131 CALM1P0DP23 149 aa13.19□□□□□ -0.3
VMP1-207ENST00000588131 CALM2P0DP24 149 aa13.19□□□□□ -0.3
VMP1-207ENST00000588131 CALM3P0DP25 149 aa13.19□□□□□ -0.3
VMP1-207ENST00000588131 INPP5BP32019 993 aa13.19□□□□□ -0.3
VMP1-207ENST00000588131 ICA1Q05084 483 aa13.19□□□□□ -0.3
VMP1-207ENST00000588131 GRM4Q14833 912 aa13.19□□□□□ -0.3
VMP1-207ENST00000588131 NTRK3Q16288 839 aa13.19□□□□□ -0.3
VMP1-207ENST00000588131 IFFO2Q5TF58 517 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms