RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 AATFQ9NY61 560 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■■■□□ 15
TMC6-209ENST00000588087 ADKP55263 362 aaKnown RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 SF3B3Q15393 1217 aaKnown RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 KLHL10Q6JEL2 608 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 IQCA1Q86XH1 822 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 ENOX1Q8TC92 643 aaKnown RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 SYMPKQ92797 1274 aaKnown RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 DUOX1Q9NRD9 1551 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 WNK3Q9BYP7 1800 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 ROBO1Q9Y6N7 1651 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 PRPF3O43395 683 aaKnown RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 ETF1P62495 437 aaKnown RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 MECOMQ03112 1051 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 REXO1L1PQ8IX06 675 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 FAM177A1Q8N128 213 aaPredicted RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 ZNF397Q8NF99 534 aaPredicted RBP24.59■■□□□ 1.53
TMC6-209ENST00000588087 FEZ1Q99689 392 aa24.59■■□□□ 1.53
TMC6-209ENST00000588087 MYO1BO43795 1136 aa24.58■■□□□ 1.53
TMC6-209ENST00000588087 STX17P56962 302 aa24.58■■□□□ 1.53
TMC6-209ENST00000588087 ERCC6LQ2NKX8 1250 aa24.58■■□□□ 1.53
TMC6-209ENST00000588087 TBC1D9BQ66K14 1250 aa24.58■■□□□ 1.53
TMC6-209ENST00000588087 TBX2Q13207 712 aaPredicted RBP24.58■■□□□ 1.52
TMC6-209ENST00000588087 CCDC93Q567U6 631 aa24.58■■□□□ 1.52
TMC6-209ENST00000588087 TRIM65Q6PJ69 517 aa24.58■■□□□ 1.52
TMC6-209ENST00000588087 TMTC3Q6ZXV5 915 aa24.58■■□□□ 1.52
TMC6-209ENST00000588087 SMYD4Q8IYR2 804 aaPredicted RBP24.58■■□□□ 1.52
TMC6-209ENST00000588087 NSUN4Q96CB9 384 aaKnown RBP24.58■■□□□ 1.52
TMC6-209ENST00000588087 DACH1Q9UI36 760 aa24.58■■□□□ 1.52
TMC6-209ENST00000588087 THRAP3Q9Y2W1 955 aaKnown RBP24.58■■□□□ 1.52
TMC6-209ENST00000588087 TAF1P21675 1872 aa24.58■■□□□ 1.52
TMC6-209ENST00000588087 CACNA1SQ13698 1873 aa24.57■■□□□ 1.52
TMC6-209ENST00000588087 PLCD1P51178 756 aa24.57■■□□□ 1.52
TMC6-209ENST00000588087 NPY5RQ15761 445 aa24.57■■□□□ 1.52
TMC6-209ENST00000588087 STAMQ92783 540 aa24.57■■□□□ 1.52
TMC6-209ENST00000588087 OGFRQ9NZT2 677 aa24.57■■□□□ 1.52
TMC6-209ENST00000588087 DDX41Q9UJV9 622 aaKnown RBP24.57■■□□□ 1.52
TMC6-209ENST00000588087 ADAMTS3O15072 1205 aa24.57■■□□□ 1.52
TMC6-209ENST00000588087 VEGFAP15692 232 aaPredicted RBP24.57■■□□□ 1.52
TMC6-209ENST00000588087 CD44P16070 742 aaKnown RBP24.57■■□□□ 1.52
TMC6-209ENST00000588087 PRDX5P30044 214 aa24.57■■□□□ 1.52
TMC6-209ENST00000588087 SRBD1Q8N5C6 995 aaKnown RBP24.57■■□□□ 1.52
TMC6-209ENST00000588087 KANK3Q6NY19 840 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 CLEC4GQ6UXB4 293 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 SPATA20Q8TB22 786 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 PAGE5Q96GU1 130 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 BAG1Q99933 345 aaPredicted RBP24.56■■□□□ 1.52
TMC6-209ENST00000588087 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.56■■□□□ 1.525e-7■■□□□ 12.9
TMC6-209ENST00000588087 CNTNAP5Q8WYK1 1306 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 PPP2R5BQ15173 497 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 SPECC1LQ69YQ0 1117 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 TC2NQ8N9U0 490 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 TRIML1Q8N9V2 468 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 RBM28Q9NW13 759 aaKnown RBP24.56■■□□□ 1.52
TMC6-209ENST00000588087 PRDM4Q9UKN5 801 aa24.56■■□□□ 1.52
TMC6-209ENST00000588087 SPATA31A5Q5VU36 1347 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 SPATA31A7Q8IWB4 1347 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 RREB1Q92766 1687 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 VWA3AA6NCI4 1184 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 COBLO75128 1261 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 TOGARAM2Q6ZUX3 1019 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 FBXO33Q7Z6M2 555 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 SLC51AQ86UW1 340 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 TNFRSF25Q93038 417 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 SRP68Q9UHB9 627 aaKnown RBP24.55■■□□□ 1.52
TMC6-209ENST00000588087 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.55■■□□□ 1.525e-7■■■□□ 17.7
TMC6-209ENST00000588087 PPP2R2CQ9Y2T4 447 aa24.55■■□□□ 1.52
TMC6-209ENST00000588087 CCP110O43303 1012 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 IGSF3O75054 1194 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 TTC38Q5R3I4 469 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 PTF1AQ7RTS3 328 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 DCP1AQ9NPI6 582 aaPredicted RBP24.54■■□□□ 1.52
TMC6-209ENST00000588087 ARHGAP6O43182 974 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 FGRP09769 529 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 SLFN14P0C7P3 912 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 SMARCC1Q92922 1105 aaPredicted RBP24.54■■□□□ 1.52
TMC6-209ENST00000588087 LAMB2P55268 1798 aa24.54■■□□□ 1.52
TMC6-209ENST00000588087 BAZ2AQ9UIF9 1905 aaKnown RBP24.53■■□□□ 1.52
TMC6-209ENST00000588087 DDAH1O94760 285 aa24.53■■□□□ 1.52
TMC6-209ENST00000588087 DMTNQ08495 405 aa24.53■■□□□ 1.52
TMC6-209ENST00000588087 BRMS1Q9HCU9 246 aa24.53■■□□□ 1.52
TMC6-209ENST00000588087 PHLPP2Q6ZVD8 1323 aa24.53■■□□□ 1.52
TMC6-209ENST00000588087 TEX33O43247 280 aa24.53■■□□□ 1.52
TMC6-209ENST00000588087 PTGDRQ13258 359 aa24.53■■□□□ 1.52
TMC6-209ENST00000588087 CTCFLQ8NI51 663 aaPredicted RBP24.53■■□□□ 1.52
TMC6-209ENST00000588087 DESI2Q9BSY9 194 aa24.53■■□□□ 1.52
TMC6-209ENST00000588087 URI1O94763 535 aaPredicted RBP24.52■■□□□ 1.52
TMC6-209ENST00000588087 PIK3AP1Q6ZUJ8 805 aa24.52■■□□□ 1.52
TMC6-209ENST00000588087 COL22A1Q8NFW1 1626 aaPredicted RBP24.52■■□□□ 1.52
TMC6-209ENST00000588087 CALM1P0DP23 149 aa24.52■■□□□ 1.52
TMC6-209ENST00000588087 CALM2P0DP24 149 aa24.52■■□□□ 1.52
TMC6-209ENST00000588087 CALM3P0DP25 149 aa24.52■■□□□ 1.52
TMC6-209ENST00000588087 RPS8P62241 208 aaKnown RBP24.52■■□□□ 1.52
TMC6-209ENST00000588087 SH3RF1Q7Z6J0 888 aa24.52■■□□□ 1.52
TMC6-209ENST00000588087 MYH2Q9UKX2 1941 aa24.51■■□□□ 1.51
TMC6-209ENST00000588087 TXNRD3Q86VQ6 643 aa24.51■■□□□ 1.51
TMC6-209ENST00000588087 FERMT2Q96AC1 680 aa24.51■■□□□ 1.51
TMC6-209ENST00000588087 CRNKL1Q9BZJ0 848 aaKnown RBP24.51■■□□□ 1.51
TMC6-209ENST00000588087 BLZF1Q9H2G9 400 aa24.51■■□□□ 1.51
TMC6-209ENST00000588087 SYNRGQ9UMZ2 1314 aa24.51■■□□□ 1.51
TMC6-209ENST00000588087 ZSCAN12O43309 604 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms