RNA–Protein interactions for RNA: ENST00000587708.6

PSENEN-202, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-202ENST00000587708 YEATS4O95619 227 aa20.27■□□□□ 0.84
PSENEN-202ENST00000587708 RBM5P52756 815 aaKnown RBP eCLIP20.27■□□□□ 0.84
PSENEN-202ENST00000587708 CCDC183Q5T5S1 534 aa20.27■□□□□ 0.84
PSENEN-202ENST00000587708 FOXP1Q9H334 677 aaPredicted RBP20.27■□□□□ 0.84
PSENEN-202ENST00000587708 SCN9AQ15858 1988 aa20.27■□□□□ 0.83
PSENEN-202ENST00000587708 ENTPD3O75355 529 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 MMP1P03956 469 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 SMARCA1P28370 1054 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 FOSBP53539 338 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 GNL2Q13823 731 aaKnown RBP20.26■□□□□ 0.83
PSENEN-202ENST00000587708 MYSM1Q5VVJ2 828 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 NIM1KQ8IY84 436 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 DDX4Q9NQI0 724 aaKnown RBP20.26■□□□□ 0.83
PSENEN-202ENST00000587708 TOP1P11387 765 aaKnown RBP20.26■□□□□ 0.83
PSENEN-202ENST00000587708 GRM4Q14833 912 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 SLC4A8Q2Y0W8 1093 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
PSENEN-202ENST00000587708 FOXP4Q8IVH2 680 aaPredicted RBP20.26■□□□□ 0.83
PSENEN-202ENST00000587708 OGFOD1Q8N543 542 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 SLC44A5Q8NCS7 719 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 AGBL3Q8NEM8 1001 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 KCNG4Q8TDN1 519 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 PI4KBQ9UBF8 816 aa20.26■□□□□ 0.83
PSENEN-202ENST00000587708 COL2A1P02458 1487 aaPredicted RBP20.25■□□□□ 0.83
PSENEN-202ENST00000587708 MYH15Q9Y2K3 1946 aa20.25■□□□□ 0.83
PSENEN-202ENST00000587708 NASPP49321 788 aaPredicted RBP20.25■□□□□ 0.83
PSENEN-202ENST00000587708 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
PSENEN-202ENST00000587708 USP28Q96RU2 1077 aa20.25■□□□□ 0.83
PSENEN-202ENST00000587708 GMLQ99445 158 aa20.25■□□□□ 0.83
PSENEN-202ENST00000587708 SGIP1Q9BQI5 828 aa20.25■□□□□ 0.83
PSENEN-202ENST00000587708 ECM29Q5VYK3 1845 aa20.25■□□□□ 0.83
PSENEN-202ENST00000587708 R3HDM1Q15032 1099 aaKnown RBP20.24■□□□□ 0.83
PSENEN-202ENST00000587708 LRSAM1Q6UWE0 723 aa20.24■□□□□ 0.83
PSENEN-202ENST00000587708 TMEM47Q9BQJ4 181 aa20.24■□□□□ 0.83
PSENEN-202ENST00000587708 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
PSENEN-202ENST00000587708 ZNF277Q9NRM2 450 aaPredicted RBP20.24■□□□□ 0.83
PSENEN-202ENST00000587708 STX8Q9UNK0 236 aa20.24■□□□□ 0.83
PSENEN-202ENST00000587708 V9GY48 417 aaPredicted RBP20.24■□□□□ 0.83
PSENEN-202ENST00000587708 CFAP100Q494V2 611 aa20.23■□□□□ 0.83
PSENEN-202ENST00000587708 MTMR14Q8NCE2 650 aa20.23■□□□□ 0.83
PSENEN-202ENST00000587708 UPF1Q92900 1129 aaKnown RBP eCLIP20.23■□□□□ 0.83
PSENEN-202ENST00000587708 AIFM3Q96NN9 605 aa20.23■□□□□ 0.83
PSENEN-202ENST00000587708 TAOK3Q9H2K8 898 aa20.23■□□□□ 0.83
PSENEN-202ENST00000587708 PKN1Q16512 942 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
PSENEN-202ENST00000587708 BRMS1Q9HCU9 246 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 SH3GLB2Q9NR46 395 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 DDX19AQ9NUU7 478 aaKnown RBP20.22■□□□□ 0.83
PSENEN-202ENST00000587708 TMOD2Q9NZR1 351 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 LTBP3Q9NS15 1303 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 PALM3A6NDB9 673 aaPredicted RBP20.22■□□□□ 0.83
PSENEN-202ENST00000587708 PLEKHA8P1O95397 391 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 GUCY1A2P33402 732 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 FKBP1CQ5VVH2 108 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 METTL16Q86W50 562 aaKnown RBP20.22■□□□□ 0.83
PSENEN-202ENST00000587708 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 CCDC82Q8N4S0 544 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 JMYQ8N9B5 988 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 LINC00301Q8NCQ3 95 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 JDP2Q8WYK2 163 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 MTMR4Q9NYA4 1195 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 CNTNAP5Q8WYK1 1306 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 ATRNL1Q5VV63 1379 aa20.22■□□□□ 0.83
PSENEN-202ENST00000587708 IGKV6D-41A0A0C4DH26 115 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 PSMD14O00487 310 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 STK38Q15208 465 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 RILPL1Q5EBL4 403 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 ANO1Q5XXA6 986 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 ADALQ6DHV7 355 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 DIS3L2Q8IYB7 885 aaKnown RBP20.21■□□□□ 0.83
PSENEN-202ENST00000587708 CEP95Q96GE4 821 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 GRPEL1Q9HAV7 217 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 GJB4Q9NTQ9 266 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 FAM198AQ9UFP1 575 aa20.21■□□□□ 0.83
PSENEN-202ENST00000587708 A0A1W2PQ27 194 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 A0A1W2PQ64 194 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 A0A1W2PQD8 194 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 SCG2P13521 617 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 NFIAQ12857 509 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 TNIP1Q15025 636 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 SF3A1Q15459 793 aaKnown RBP20.2■□□□□ 0.82
PSENEN-202ENST00000587708 PFKFB3Q16875 520 aaPredicted RBP20.2■□□□□ 0.82
PSENEN-202ENST00000587708 CMTR1Q8N1G2 835 aaKnown RBP20.2■□□□□ 0.82
PSENEN-202ENST00000587708 PGBD1Q96JS3 809 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 PHF20Q9BVI0 1012 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 MAD2L2Q9UI95 211 aa20.2■□□□□ 0.82
PSENEN-202ENST00000587708 SPDYE2BA6NHP3 402 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 TTLL1O95922 423 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 SPDYE6P0CI01 402 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 SHMT1P34896 483 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 SLC39A14Q15043 492 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 DLGAP5Q15398 846 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 TRIM34Q9BYJ4 488 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 SPTLC2O15270 562 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 PPP6R2O75170 966 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 RAD17O75943 681 aa20.19■□□□□ 0.82
PSENEN-202ENST00000587708 PARP1P09874 1014 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms