RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 METTL16Q86W50 562 aaKnown RBP7.82□□□□□ -1.16
SDF2-205ENST00000587629 MIER1Q8N108 512 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 PANK1Q8TE04 598 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 ZNF512BQ96KM6 892 aaPredicted RBP7.82□□□□□ -1.16
SDF2-205ENST00000587629 FEZ1Q99689 392 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 NUDT12Q9BQG2 462 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 PORCNQ9H237 461 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 PRO3102Q9H379 93 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 CWC22Q9HCG8 908 aaKnown RBP7.82□□□□□ -1.16
SDF2-205ENST00000587629 IL1RAPL2Q9NP60 686 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 NOP58Q9Y2X3 529 aaKnown RBP7.82□□□□□ -1.16
SDF2-205ENST00000587629 ATAD5Q96QE3 1844 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 LOC285556D6RIA3 1793 aa7.82□□□□□ -1.16
SDF2-205ENST00000587629 SIPA1L1O43166 1804 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 SOX1O00570 391 aaPredicted RBP7.81□□□□□ -1.16
SDF2-205ENST00000587629 CCND3P30281 292 aaPredicted RBP7.81□□□□□ -1.16
SDF2-205ENST00000587629 MAPK4P31152 587 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 PLCD1P51178 756 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 ATN1P54259 1190 aaPredicted RBP7.81□□□□□ -1.16
SDF2-205ENST00000587629 ERVK-9P63128 1117 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 ERVK-24P63145 666 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 CACNB2Q08289 660 aaPredicted RBP7.81□□□□□ -1.16
SDF2-205ENST00000587629 MAP3K12Q12852 859 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 PDE3AQ14432 1141 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 CERKLQ49MI3 558 aaPredicted RBP7.81□□□□□ -1.16
SDF2-205ENST00000587629 WDR78Q5VTH9 848 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 CEP85Q6P2H3 762 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 GPR142Q7Z601 462 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 ACER1Q8TDN7 264 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 LRCH3Q96II8 777 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 NBPF3Q9H094 633 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 DOCK3Q8IZD9 2030 aa7.81□□□□□ -1.16
SDF2-205ENST00000587629 MAGEB6P1A0A0J9YX57 407 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 MPHOSPH10O00566 681 aaKnown RBP7.8□□□□□ -1.16
SDF2-205ENST00000587629 POLR3DP05423 398 aaPredicted RBP7.8□□□□□ -1.16
SDF2-205ENST00000587629 ZKSCAN1P17029 563 aaPredicted RBP7.8□□□□□ -1.16
SDF2-205ENST00000587629 MNX1P50219 401 aaPredicted RBP7.8□□□□□ -1.16
SDF2-205ENST00000587629 ABCB5Q2M3G0 1257 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 TATDN1Q6P1N9 297 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 PLEKHH3Q7Z736 793 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 TTC6Q86TZ1 520 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 ANKLE1Q8NAG6 615 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 C11orf49Q9H6J7 331 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 GINM1Q9NU53 330 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 SERPINB13Q9UIV8 391 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 OGDHLQ9ULD0 1010 aa7.8□□□□□ -1.16
SDF2-205ENST00000587629 MYO5AQ9Y4I1 1855 aaKnown RBP7.8□□□□□ -1.16
SDF2-205ENST00000587629 MAST2Q6P0Q8 1798 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L15C9J2P7 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L13C9JLJ4 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L11C9JVI0 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L18D6R9N7 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 GOLIM4O00461 696 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 CNMDO75829 334 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 XRCC5P13010 732 aaKnown RBP7.79□□□□□ -1.16
SDF2-205ENST00000587629 CAPN2P17655 700 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 VCAM1P19320 739 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 SHMT1P34896 483 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 RGS2P41220 211 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 SEPT2Q15019 361 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 MORN1Q5T089 497 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 SLC9C2Q5TAH2 1124 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 MAP3K21Q5TCX8 1036 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 CATSPERGQ6ZRH7 1159 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 ERC1Q8IUD2 1116 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 RHPN1Q8TCX5 695 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 SOCS4Q8WXH5 440 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 USP6NLQ92738 828 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 EDC3Q96F86 508 aaKnown RBP7.79□□□□□ -1.16
SDF2-205ENST00000587629 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
SDF2-205ENST00000587629 RIOK1Q9BRS2 568 aaKnown RBP7.79□□□□□ -1.16
SDF2-205ENST00000587629 RPAP3Q9H6T3 665 aaPredicted RBP7.79□□□□□ -1.16
SDF2-205ENST00000587629 CABP5Q9NP86 173 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 MCM9Q9NXL9 1143 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 FLRT1Q9NZU1 646 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 BTBD7Q9P203 1132 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 CDK5RAP2Q96SN8 1893 aa7.79□□□□□ -1.16
SDF2-205ENST00000587629 PLXNB2O15031 1838 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 IFIT2P09913 472 aaKnown RBP7.78□□□□□ -1.16
SDF2-205ENST00000587629 CYP2D6P10635 497 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 PDE6AP16499 860 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 CNGA1P29973 690 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 GUCY1A2P33402 732 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 MAGEA10P43363 369 aaPredicted RBP7.78□□□□□ -1.16
SDF2-205ENST00000587629 USP14P54578 494 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 CCNA1P78396 465 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 ATP2B2Q01814 1243 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 MAP2K5Q13163 448 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 CERS3Q8IU89 383 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 TRMT44Q8IYL2 757 aaKnown RBP7.78□□□□□ -1.16
SDF2-205ENST00000587629 GTF3C2Q8WUA4 911 aaPredicted RBP7.78□□□□□ -1.16
SDF2-205ENST00000587629 SDR42E1Q8WUS8 393 aa7.78□□□□□ -1.16
SDF2-205ENST00000587629 APBA2Q99767 749 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms