RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 ENAHQ8N8S7 591 aaPredicted RBP17.27■□□□□ 0.36
CALR-204ENST00000586967 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 ZNF274Q96GC6 653 aaPredicted RBP17.27■□□□□ 0.36
CALR-204ENST00000586967 TCEANC2Q96MN5 208 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 AS3MTQ9HBK9 375 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 MTMR4Q9NYA4 1195 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 SLC12A7Q9Y666 1083 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.35
CALR-204ENST00000586967 ATAD5Q96QE3 1844 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
CALR-204ENST00000586967 EVCP57679 992 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 ICA1Q05084 483 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
CALR-204ENST00000586967 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 SEC23AQ15436 765 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
CALR-204ENST00000586967 ANKRD13AQ8IZ07 590 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 CEP95Q96GE4 821 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 LRRC2Q9BYS8 371 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 LY9Q9HBG7 655 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 DOCK1Q14185 1865 aa17.26■□□□□ 0.35
CALR-204ENST00000586967 PAPPA2Q9BXP8 1791 aa17.25■□□□□ 0.35
CALR-204ENST00000586967 SSC5DA1L4H1 1573 aa17.25■□□□□ 0.35
CALR-204ENST00000586967 USP17L5A8MUK1 530 aa17.25■□□□□ 0.35
CALR-204ENST00000586967 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
CALR-204ENST00000586967 DHX16O60231 1041 aaKnown RBP17.25■□□□□ 0.35
CALR-204ENST00000586967 USP2O75604 605 aaPredicted RBP17.25■□□□□ 0.35
CALR-204ENST00000586967 NOVP48745 357 aa17.25■□□□□ 0.35
CALR-204ENST00000586967 C2orf69Q8N8R5 385 aa17.25■□□□□ 0.35
CALR-204ENST00000586967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.25■□□□□ 0.351e-16■□□□□ 9.5
CALR-204ENST00000586967 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
CALR-204ENST00000586967 IL17RBQ9NRM6 502 aa17.25■□□□□ 0.35
CALR-204ENST00000586967 KLF18A0A0U1RQI7 1052 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 CCDC196A0A1B0GTZ2 297 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 KIF3CO14782 793 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 DDAH1O94760 285 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 TOMM70O94826 608 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 SEPT2Q15019 361 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 MKL1Q969V6 931 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 MAP3K14Q99558 947 aa17.24■□□□□ 0.35
CALR-204ENST00000586967 SLKQ9H2G2 1235 aaPredicted RBP17.24■□□□□ 0.35
CALR-204ENST00000586967 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
CALR-204ENST00000586967 ZBTB43O43298 467 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 NMT2O60551 498 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 KIF5BP33176 963 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 ATP2B2Q01814 1243 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 APOBRQ0VD83 1088 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 CPLX2Q6PUV4 134 aaKnown RBP17.23■□□□□ 0.35
CALR-204ENST00000586967 ZNF654Q8IZM8 581 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
CALR-204ENST00000586967 ZNF408Q9H9D4 720 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 GBA2Q9HCG7 927 aaPredicted RBP17.23■□□□□ 0.35
CALR-204ENST00000586967 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
CALR-204ENST00000586967 TRPM7Q96QT4 1865 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 MYH4Q9Y623 1939 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 GOLGA8BA8MQT2 603 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 CELF2O95319 508 aaKnown RBP17.22■□□□□ 0.35
CALR-204ENST00000586967 HSP90AA1P07900 732 aaKnown RBP17.22■□□□□ 0.35
CALR-204ENST00000586967 EEF2P13639 858 aaKnown RBP17.22■□□□□ 0.35
CALR-204ENST00000586967 INPP5BP32019 993 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 FSTL1Q12841 308 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 PRKG1Q13976 671 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 RCSD1Q6JBY9 416 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 APOA5Q6Q788 366 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
CALR-204ENST00000586967 TMEM47Q9BQJ4 181 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
CALR-204ENST00000586967 RBM28Q9NW13 759 aaKnown RBP17.22■□□□□ 0.35
CALR-204ENST00000586967 TRAF5O00463 557 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 ITGBL1O95965 494 aaPredicted RBP17.21■□□□□ 0.35
CALR-204ENST00000586967 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 GUCY1A2P33402 732 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 GNAQP50148 359 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 METAP2P50579 478 aaKnown RBP eCLIP17.21■□□□□ 0.35
CALR-204ENST00000586967 USP14P54578 494 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
CALR-204ENST00000586967 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 TPCN1Q9ULQ1 816 aa17.21■□□□□ 0.35
CALR-204ENST00000586967 GOLGA8AA7E2F4 631 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 PFKFB2O60825 505 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 CDKL5O76039 1030 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 PTPRAP18433 802 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 PDIA3P30101 505 aaKnown RBP17.2■□□□□ 0.34
CALR-204ENST00000586967 COL9A3Q14050 684 aaPredicted RBP17.2■□□□□ 0.34
CALR-204ENST00000586967 VGLL4Q14135 290 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
CALR-204ENST00000586967 ERO1BQ86YB8 467 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 GMCL1P1Q8NEA9 526 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
CALR-204ENST00000586967 ZKSCAN4Q969J2 545 aaPredicted RBP17.2■□□□□ 0.34
CALR-204ENST00000586967 FEZ1Q99689 392 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms