RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ZIC5Q96T25 663 aa22.67■■□□□ 1.22
DDX39A-204ENST00000586558 NEDD4P46934 1319 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 A0A0G2JLL6 359 aaPredicted RBP22.66■■□□□ 1.22
DDX39A-204ENST00000586558 TM4SF4P48230 202 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 BACE1P56817 501 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 TFAP4Q01664 338 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 RRP12Q5JTH9 1297 aaKnown RBP22.66■■□□□ 1.22
DDX39A-204ENST00000586558 PRRT2Q7Z6L0 340 aaPredicted RBP22.66■■□□□ 1.22
DDX39A-204ENST00000586558 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.66■■□□□ 1.22
DDX39A-204ENST00000586558 KRT23Q9C075 422 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 SH2D4AQ9H788 454 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 ARHGEF10LQ9HCE6 1279 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 INCENPQ9NQS7 918 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 PHIPQ8WWQ0 1821 aa22.66■■□□□ 1.22
DDX39A-204ENST00000586558 CCL15-CCL14A0A0B4J2E2 113 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 IGKV6D-41A0A0C4DH26 115 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 C19orf81C9J6K1 198 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 USP17L10C9JJH3 530 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 SLC27A2O14975 620 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 MAP2K1Q02750 393 aaPredicted RBP22.65■■□□□ 1.22
DDX39A-204ENST00000586558 TRDNQ13061 729 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 CCL15Q16663 113 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 SH3D19Q5HYK7 790 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 FAM47AQ5JRC9 791 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 CREB3L3Q68CJ9 461 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 FASTKD5Q7L8L6 764 aaKnown RBP22.65■■□□□ 1.22
DDX39A-204ENST00000586558 KIAA1683Q9H0B3 1180 aa22.65■■□□□ 1.22
DDX39A-204ENST00000586558 GREB1LQ9C091 1923 aaPredicted RBP22.65■■□□□ 1.22
DDX39A-204ENST00000586558 USP14P54578 494 aa22.64■■□□□ 1.21
DDX39A-204ENST00000586558 MTMR2Q13614 643 aa22.64■■□□□ 1.21
DDX39A-204ENST00000586558 PROCA1Q8NCQ7 364 aaPredicted RBP22.64■■□□□ 1.21
DDX39A-204ENST00000586558 BRI3BPQ8WY22 251 aa22.64■■□□□ 1.21
DDX39A-204ENST00000586558 FEZ1Q99689 392 aa22.64■■□□□ 1.21
DDX39A-204ENST00000586558 NYAP2Q9P242 653 aa22.64■■□□□ 1.21
DDX39A-204ENST00000586558 OTUD7BQ6GQQ9 843 aa22.63■■□□□ 1.21
DDX39A-204ENST00000586558 ZCCHC17Q9NP64 241 aaKnown RBP22.63■■□□□ 1.21
DDX39A-204ENST00000586558 MTMR4Q9NYA4 1195 aa22.63■■□□□ 1.21
DDX39A-204ENST00000586558 SYNPO2Q9UMS6 1093 aa22.63■■□□□ 1.21
DDX39A-204ENST00000586558 E7EWF7 191 aa22.62■■□□□ 1.21
DDX39A-204ENST00000586558 ZKSCAN1P17029 563 aaPredicted RBP22.62■■□□□ 1.21
DDX39A-204ENST00000586558 HMGCS2P54868 508 aa22.62■■□□□ 1.21
DDX39A-204ENST00000586558 RALYLQ86SE5 291 aaKnown RBP22.62■■□□□ 1.21
DDX39A-204ENST00000586558 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
DDX39A-204ENST00000586558 CEP95Q96GE4 821 aa22.62■■□□□ 1.21
DDX39A-204ENST00000586558 TCP11L1Q9NUJ3 509 aa22.62■■□□□ 1.21
DDX39A-204ENST00000586558 TMOD4Q9NZQ9 345 aa22.62■■□□□ 1.21
DDX39A-204ENST00000586558 TMX2Q9Y320 296 aa22.62■■□□□ 1.21
DDX39A-204ENST00000586558 B4E1Z4 1266 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 KDM4AO75164 1064 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 TTLL1O95922 423 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 ALDH1A1P00352 501 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 EEF2P13639 858 aaKnown RBP22.61■■□□□ 1.21
DDX39A-204ENST00000586558 MOGSQ13724 837 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 TSGA10IPQ3SY00 556 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 CCDC178Q5BJE1 867 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 USP17L2Q6R6M4 530 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 ANKRD23Q86SG2 305 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 IQCA1Q86XH1 822 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 IFNL1Q8IU54 200 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 CLEC10AQ8IUN9 316 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 SIAH1Q8IUQ4 282 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 NCOA7Q8NI08 942 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 C12orf42Q96LP6 360 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 TAF6LQ9Y6J9 622 aa22.61■■□□□ 1.21
DDX39A-204ENST00000586558 HSPA4P34932 840 aa22.6■■□□□ 1.21
DDX39A-204ENST00000586558 ATP2B2Q01814 1243 aa22.6■■□□□ 1.21
DDX39A-204ENST00000586558 KRT32Q14532 448 aa22.6■■□□□ 1.21
DDX39A-204ENST00000586558 GADL1Q6ZQY3 521 aa22.6■■□□□ 1.21
DDX39A-204ENST00000586558 KCNB2Q92953 911 aa22.6■■□□□ 1.21
DDX39A-204ENST00000586558 BEGAINQ9BUH8 593 aa22.6■■□□□ 1.21
DDX39A-204ENST00000586558 USP26Q9BXU7 913 aa22.6■■□□□ 1.21
DDX39A-204ENST00000586558 A0A1W2PRG0 241 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 IGF2BP3O00425 579 aaKnown RBP eCLIP22.59■■□□□ 1.21
DDX39A-204ENST00000586558 CA12O43570 354 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 MCCP23508 829 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 NOVP48745 357 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 C8orf34Q49A92 452 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 STOX1Q6ZVD7 989 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 LPAR1Q92633 364 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 MKL1Q969V6 931 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 PTPN18Q99952 460 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 IL17RBQ9NRM6 502 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 WBP1LQ9NX94 342 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 ZSWIM5Q9P217 1185 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 AGTPBP1Q9UPW5 1226 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 SLC45A1Q9Y2W3 748 aa22.59■■□□□ 1.21
DDX39A-204ENST00000586558 LOC285556D6RIA3 1793 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 BTBD19C9JJ37 291 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 PABPC4Q13310 644 aaKnown RBP eCLIP22.58■■□□□ 1.21
DDX39A-204ENST00000586558 TTC14Q96N46 770 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 VCPKMTQ9H867 229 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 GOPCQ9HD26 462 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 EMILIN3Q9NT22 766 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 SAGE1Q9NXZ1 904 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 CLIP2Q9UDT6 1046 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 PTPRFP10586 1907 aa22.58■■□□□ 1.21
DDX39A-204ENST00000586558 ZYXQ15942 572 aaKnown RBP22.57■■□□□ 1.2
DDX39A-204ENST00000586558 GPAT2Q6NUI2 795 aa22.57■■□□□ 1.2
DDX39A-204ENST00000586558 UBAC1Q9BSL1 405 aa22.57■■□□□ 1.2
DDX39A-204ENST00000586558 STX8Q9UNK0 236 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms