RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 IRF5Q13568 498 aa22.47■■□□□ 1.19
ATG4D-203ENST00000585752 MTFR1Q15390 333 aa22.47■■□□□ 1.19
ATG4D-203ENST00000585752 LRRFIP1Q32MZ4 808 aaKnown RBP22.47■■□□□ 1.19
ATG4D-203ENST00000585752 PXYLP1Q8TE99 480 aa22.47■■□□□ 1.19
ATG4D-203ENST00000585752 SLC4A4Q9Y6R1 1079 aa22.47■■□□□ 1.19
ATG4D-203ENST00000585752 TTC41PQ6P2S7 1318 aa22.47■■□□□ 1.19
ATG4D-203ENST00000585752 DDX60LQ5H9U9 1706 aaKnown RBP22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L15C9J2P7 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L13C9JLJ4 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L11C9JVI0 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L18D6R9N7 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L22D6RA61 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L17D6RBQ6 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L19D6RCP7 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L20D6RJB6 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 CCL5P13501 91 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 SHMT1P34896 483 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 USP17L24Q0WX57 530 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 CHD1LQ86WJ1 897 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 EMILIN3Q9NT22 766 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 HTTP42858 3142 aa22.46■■□□□ 1.19
ATG4D-203ENST00000585752 PAGR1Q9BTK6 254 aa22.45■■□□□ 1.18
ATG4D-203ENST00000585752 CENPFP49454 3210 aa22.45■■□□□ 1.18
ATG4D-203ENST00000585752 PRKAB2O43741 272 aa22.44■■□□□ 1.18
ATG4D-203ENST00000585752 ELNP15502 786 aa22.44■■□□□ 1.18
ATG4D-203ENST00000585752 NUCB1Q02818 461 aa22.44■■□□□ 1.18
ATG4D-203ENST00000585752 TSHZ3Q63HK5 1081 aa22.44■■□□□ 1.18
ATG4D-203ENST00000585752 KIAA1683Q9H0B3 1180 aa22.44■■□□□ 1.18
ATG4D-203ENST00000585752 MORF4L1Q9UBU8 362 aa22.44■■□□□ 1.18
ATG4D-203ENST00000585752 GLRX3O76003 335 aaKnown RBP22.43■■□□□ 1.18
ATG4D-203ENST00000585752 INHAP05111 366 aa22.43■■□□□ 1.18
ATG4D-203ENST00000585752 SEPT2Q15019 361 aa22.43■■□□□ 1.18
ATG4D-203ENST00000585752 SLFNL1Q499Z3 407 aa22.43■■□□□ 1.18
ATG4D-203ENST00000585752 C12orf42Q96LP6 360 aa22.43■■□□□ 1.18
ATG4D-203ENST00000585752 ARHGEF10LQ9HCE6 1279 aa22.43■■□□□ 1.18
ATG4D-203ENST00000585752 GJB1P08034 283 aa22.42■■□□□ 1.18
ATG4D-203ENST00000585752 ZFYP08048 801 aaPredicted RBP22.42■■□□□ 1.18
ATG4D-203ENST00000585752 CYP2D6P10635 497 aa22.42■■□□□ 1.18
ATG4D-203ENST00000585752 MAPK4P31152 587 aa22.42■■□□□ 1.18
ATG4D-203ENST00000585752 CCNA1P78396 465 aa22.42■■□□□ 1.18
ATG4D-203ENST00000585752 GABPAQ06546 454 aa22.42■■□□□ 1.18
ATG4D-203ENST00000585752 TMEM179Q6ZVK1 233 aa22.42■■□□□ 1.18
ATG4D-203ENST00000585752 NUDT12Q9BQG2 462 aa22.42■■□□□ 1.18
ATG4D-203ENST00000585752 GJA8P48165 433 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 ERVK-9P63128 1117 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 ERVK-24P63145 666 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 KBTBD3Q8NAB2 608 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 ACER1Q8TDN7 264 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 OTUD7AQ8TE49 926 aaPredicted RBP22.41■■□□□ 1.18
ATG4D-203ENST00000585752 DYNLL2Q96FJ2 89 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 CCDC136Q96JN2 1154 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 CCDC17Q96LX7 622 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 UNC93B1Q9H1C4 597 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 SH2D4AQ9H788 454 aa22.41■■□□□ 1.18
ATG4D-203ENST00000585752 USP17L12C9JPN9 530 aa22.4■■□□□ 1.18
ATG4D-203ENST00000585752 USP17L21D6R901 530 aa22.4■■□□□ 1.18
ATG4D-203ENST00000585752 TFRCP02786 760 aaKnown RBP22.4■■□□□ 1.18
ATG4D-203ENST00000585752 WDR78Q5VTH9 848 aa22.4■■□□□ 1.18
ATG4D-203ENST00000585752 CATSPERGQ6ZRH7 1159 aa22.4■■□□□ 1.18
ATG4D-203ENST00000585752 SOCS4Q8WXH5 440 aa22.4■■□□□ 1.18
ATG4D-203ENST00000585752 PUS7LQ9H0K6 701 aaKnown RBP22.4■■□□□ 1.18
ATG4D-203ENST00000585752 RPAP3Q9H6T3 665 aaPredicted RBP22.4■■□□□ 1.18
ATG4D-203ENST00000585752 RNF113AO15541 343 aaKnown RBP22.39■■□□□ 1.17
ATG4D-203ENST00000585752 APPP05067 770 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 CAPN2P17655 700 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 VCAM1P19320 739 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 CYP2B6P20813 491 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 C12orf60Q5U649 245 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 SLC44A5Q8NCS7 719 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 APPBP2Q92624 585 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 DPF3Q92784 378 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 RBPJLQ9UBG7 517 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 ARPP21Q9UBL0 812 aaPredicted RBP22.39■■□□□ 1.17
ATG4D-203ENST00000585752 RABGAP1Q9Y3P9 1069 aa22.39■■□□□ 1.17
ATG4D-203ENST00000585752 SGPL1O95470 568 aa22.38■■□□□ 1.17
ATG4D-203ENST00000585752 HMGCRP04035 888 aa22.38■■□□□ 1.17
ATG4D-203ENST00000585752 CDK8P49336 464 aa22.38■■□□□ 1.17
ATG4D-203ENST00000585752 PDE1AP54750 535 aa22.38■■□□□ 1.17
ATG4D-203ENST00000585752 U2AF1L4Q8WU68 220 aaKnown RBP22.38■■□□□ 1.17
ATG4D-203ENST00000585752 TANGO6Q9C0B7 1094 aa22.38■■□□□ 1.17
ATG4D-203ENST00000585752 TXNRD2Q9NNW7 524 aa22.38■■□□□ 1.17
ATG4D-203ENST00000585752 GNAT2P19087 354 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 GUCY1A2P33402 732 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 ATP2B2Q01814 1243 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 ICA1Q05084 483 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 CENPQQ7L2Z9 268 aaPredicted RBP22.37■■□□□ 1.17
ATG4D-203ENST00000585752 PLEKHH3Q7Z736 793 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 TRMT44Q8IYL2 757 aaKnown RBP22.37■■□□□ 1.17
ATG4D-203ENST00000585752 HTATIP2Q9BUP3 242 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 HMX1Q9NP08 348 aaPredicted RBP22.37■■□□□ 1.17
ATG4D-203ENST00000585752 HOXC10Q9NYD6 342 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 IVNS1ABPQ9Y6Y0 642 aa22.37■■□□□ 1.17
ATG4D-203ENST00000585752 CYP2D7A0A087X1C5 515 aa22.36■■□□□ 1.17
ATG4D-203ENST00000585752 MINDY4BA8MYZ0 360 aa22.36■■□□□ 1.17
ATG4D-203ENST00000585752 CHGBP05060 677 aa22.36■■□□□ 1.17
ATG4D-203ENST00000585752 AKR1B1P15121 316 aa22.36■■□□□ 1.17
ATG4D-203ENST00000585752 RGS2P41220 211 aa22.36■■□□□ 1.17
ATG4D-203ENST00000585752 EVX2Q03828 476 aa22.36■■□□□ 1.17
ATG4D-203ENST00000585752 Q3C1V9 767 aa22.36■■□□□ 1.17
ATG4D-203ENST00000585752 CTR9Q6PD62 1173 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms