RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 USP17L10C9JJH3 530 aa25.46■■□□□ 1.67
RETREG3-202ENST00000585726 ALDH1A1P00352 501 aa25.46■■□□□ 1.67
RETREG3-202ENST00000585726 BACE1P56817 501 aa25.46■■□□□ 1.67
RETREG3-202ENST00000585726 ATP2B2Q01814 1243 aa25.46■■□□□ 1.67
RETREG3-202ENST00000585726 IMMTQ16891 758 aaKnown RBP25.46■■□□□ 1.67
RETREG3-202ENST00000585726 RRP12Q5JTH9 1297 aaKnown RBP25.46■■□□□ 1.67
RETREG3-202ENST00000585726 MYH8P13535 1937 aa25.45■■□□□ 1.67
RETREG3-202ENST00000585726 ICA1Q05084 483 aa25.45■■□□□ 1.66
RETREG3-202ENST00000585726 SAGE1Q9NXZ1 904 aa25.45■■□□□ 1.66
RETREG3-202ENST00000585726 TMOD4Q9NZQ9 345 aa25.45■■□□□ 1.66
RETREG3-202ENST00000585726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.45■■□□□ 1.66
RETREG3-202ENST00000585726 PDHXO00330 501 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 RANBP6O60518 1105 aaKnown RBP25.44■■□□□ 1.66
RETREG3-202ENST00000585726 TSPY3P0CV98 308 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 TSPY8P0CW00 308 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 CTCFP49711 727 aaPredicted RBP25.44■■□□□ 1.66
RETREG3-202ENST00000585726 TFAP4Q01664 338 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 GPAT2Q6NUI2 795 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 ANKRD23Q86SG2 305 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 TBC1D10CQ8IV04 446 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 NBPF3Q9H094 633 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 ANO2Q9NQ90 1003 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 PCNTO95613 3336 aa25.44■■□□□ 1.66
RETREG3-202ENST00000585726 TSPY2A6NKD2 308 aa25.43■■□□□ 1.66
RETREG3-202ENST00000585726 C19orf81C9J6K1 198 aa25.43■■□□□ 1.66
RETREG3-202ENST00000585726 HSPA8P11142 646 aaKnown RBP25.43■■□□□ 1.66
RETREG3-202ENST00000585726 LBX1P52954 281 aa25.43■■□□□ 1.66
RETREG3-202ENST00000585726 TAF1CQ15572 869 aaPredicted RBP25.43■■□□□ 1.66
RETREG3-202ENST00000585726 AKNAD1Q5T1N1 836 aa25.43■■□□□ 1.66
RETREG3-202ENST00000585726 MFSD6Q6ZSS7 791 aa25.43■■□□□ 1.66
RETREG3-202ENST00000585726 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.43■■□□□ 1.66
RETREG3-202ENST00000585726 R3HDMLQ9H3Y0 253 aa25.43■■□□□ 1.66
RETREG3-202ENST00000585726 KANSL2Q9H9L4 492 aa25.43■■□□□ 1.66
RETREG3-202ENST00000585726 U3KPZ7 1027 aaPredicted RBP25.43■■□□□ 1.66
RETREG3-202ENST00000585726 A0A1W2PRG0 241 aa25.42■■□□□ 1.66
RETREG3-202ENST00000585726 EEF2P13639 858 aaKnown RBP25.42■■□□□ 1.66
RETREG3-202ENST00000585726 SH3D19Q5HYK7 790 aa25.42■■□□□ 1.66
RETREG3-202ENST00000585726 TREML2Q5T2D2 321 aa25.42■■□□□ 1.66
RETREG3-202ENST00000585726 USP17L2Q6R6M4 530 aa25.42■■□□□ 1.66
RETREG3-202ENST00000585726 ARHGEF10LQ9HCE6 1279 aa25.42■■□□□ 1.66
RETREG3-202ENST00000585726 CRHR2Q13324 411 aa25.41■■□□□ 1.66
RETREG3-202ENST00000585726 SIAH1Q8IUQ4 282 aa25.41■■□□□ 1.66
RETREG3-202ENST00000585726 PROCA1Q8NCQ7 364 aaPredicted RBP25.41■■□□□ 1.66
RETREG3-202ENST00000585726 STAG1Q8WVM7 1258 aa25.41■■□□□ 1.66
RETREG3-202ENST00000585726 LSG1Q9H089 658 aaKnown RBP25.41■■□□□ 1.66
RETREG3-202ENST00000585726 RNF41Q9H4P4 317 aaPredicted RBP25.41■■□□□ 1.66
RETREG3-202ENST00000585726 EMILIN3Q9NT22 766 aa25.41■■□□□ 1.66
RETREG3-202ENST00000585726 AGTPBP1Q9UPW5 1226 aa25.41■■□□□ 1.66
RETREG3-202ENST00000585726 ORC4O43929 436 aa25.4■■□□□ 1.66
RETREG3-202ENST00000585726 USP14P54578 494 aa25.4■■□□□ 1.66
RETREG3-202ENST00000585726 NEDD1Q8NHV4 660 aa25.4■■□□□ 1.66
RETREG3-202ENST00000585726 MAP4K1Q92918 833 aa25.4■■□□□ 1.66
RETREG3-202ENST00000585726 KIAA1683Q9H0B3 1180 aa25.4■■□□□ 1.66
RETREG3-202ENST00000585726 ZFYVE28Q9HCC9 887 aa25.4■■□□□ 1.66
RETREG3-202ENST00000585726 RBM8AQ9Y5S9 174 aaKnown RBP25.4■■□□□ 1.66
RETREG3-202ENST00000585726 NEDD4P46934 1319 aa25.39■■□□□ 1.66
RETREG3-202ENST00000585726 FGRP09769 529 aa25.39■■□□□ 1.66
RETREG3-202ENST00000585726 CYP2C8P10632 490 aa25.39■■□□□ 1.66
RETREG3-202ENST00000585726 CEP95Q96GE4 821 aa25.39■■□□□ 1.66
RETREG3-202ENST00000585726 GTF3C3Q9Y5Q9 886 aa25.39■■□□□ 1.66
RETREG3-202ENST00000585726 IGKV6D-41A0A0C4DH26 115 aa25.38■■□□□ 1.65
RETREG3-202ENST00000585726 RAD21O60216 631 aa25.38■■□□□ 1.65
RETREG3-202ENST00000585726 ZCCHC17Q9NP64 241 aaKnown RBP25.38■■□□□ 1.65
RETREG3-202ENST00000585726 CLIP2Q9UDT6 1046 aa25.38■■□□□ 1.65
RETREG3-202ENST00000585726 NMT2O60551 498 aa25.37■■□□□ 1.65
RETREG3-202ENST00000585726 CYP21A2P08686 494 aa25.37■■□□□ 1.65
RETREG3-202ENST00000585726 SH2D4AQ9H788 454 aa25.37■■□□□ 1.65
RETREG3-202ENST00000585726 TMX2Q9Y320 296 aa25.37■■□□□ 1.65
RETREG3-202ENST00000585726 PTPRFP10586 1907 aa25.37■■□□□ 1.65
RETREG3-202ENST00000585726 PCP11498 1178 aaKnown RBP25.36■■□□□ 1.65
RETREG3-202ENST00000585726 PABPC4Q13310 644 aaKnown RBP eCLIP25.36■■□□□ 1.65
RETREG3-202ENST00000585726 SPICE1Q8N0Z3 855 aa25.36■■□□□ 1.65
RETREG3-202ENST00000585726 NKX2-3Q8TAU0 364 aa25.36■■□□□ 1.65
RETREG3-202ENST00000585726 PARK7Q99497 189 aaKnown RBP25.36■■□□□ 1.65
RETREG3-202ENST00000585726 MTMR4Q9NYA4 1195 aa25.36■■□□□ 1.65
RETREG3-202ENST00000585726 NYAP2Q9P242 653 aa25.36■■□□□ 1.65
RETREG3-202ENST00000585726 B4E1Z4 1266 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 GPR25O00155 361 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 OSBPP22059 807 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 ESR2Q92731 530 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 C12orf42Q96LP6 360 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 CFHR5Q9BXR6 569 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 IL17RBQ9NRM6 502 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 STX8Q9UNK0 236 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 SLC45A1Q9Y2W3 748 aa25.35■■□□□ 1.65
RETREG3-202ENST00000585726 PLIN4Q96Q06 1357 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 KDM4AO75164 1064 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 TTLL1O95922 423 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 VCAM1P19320 739 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 KIAA1755Q5JYT7 1200 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 VCPKMTQ9H867 229 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 CPA4Q9UI42 421 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 PNMA3Q9UL41 463 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 TAF6LQ9Y6J9 622 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 LAMA4Q16363 1823 aa25.34■■□□□ 1.65
RETREG3-202ENST00000585726 LOC285556D6RIA3 1793 aa25.33■■□□□ 1.65
RETREG3-202ENST00000585726 TLR2O60603 784 aa25.33■■□□□ 1.65
RETREG3-202ENST00000585726 IRX3P78415 501 aaPredicted RBP25.33■■□□□ 1.65
RETREG3-202ENST00000585726 LRRC47Q8N1G4 583 aaKnown RBP25.33■■□□□ 1.65
RETREG3-202ENST00000585726 SMCR8Q8TEV9 937 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms