RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 HOXA7P31268 230 aaPredicted RBP10.35□□□□□ -0.75
ATG4D-202ENST00000585437 DYNLL2Q96FJ2 89 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 ARHGAP39Q9C0H5 1083 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 KIAA1683Q9H0B3 1180 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 CPA4Q9UI42 421 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 PNMA3Q9UL41 463 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 HPS5Q9UPZ3 1129 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 PTPN22Q9Y2R2 807 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 TRIM17Q9Y577 477 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 PLIN4Q96Q06 1357 aa10.35□□□□□ -0.75
ATG4D-202ENST00000585437 CDK8P49336 464 aa10.34□□□□□ -0.75
ATG4D-202ENST00000585437 PABPC4Q13310 644 aaKnown RBP eCLIP10.34□□□□□ -0.753e-36■■■□□ 18.1
ATG4D-202ENST00000585437 SEPT2Q15019 361 aa10.34□□□□□ -0.75
ATG4D-202ENST00000585437 TMEM179Q6ZVK1 233 aa10.34□□□□□ -0.75
ATG4D-202ENST00000585437 AMOTL1Q8IY63 956 aa10.34□□□□□ -0.75
ATG4D-202ENST00000585437 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
ATG4D-202ENST00000585437 ASCC2Q9H1I8 757 aaPredicted RBP10.34□□□□□ -0.75
ATG4D-202ENST00000585437 EFCC1Q9HA90 598 aa10.34□□□□□ -0.75
ATG4D-202ENST00000585437 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
ATG4D-202ENST00000585437 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 A0A0D9SFI3 127 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
ATG4D-202ENST00000585437 CAPN15O75808 1086 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 AKR1B1P15121 316 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 PDE4AP27815 886 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 USP14P54578 494 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 RAB3GAP1Q15042 981 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 FAM110CQ1W6H9 321 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L2Q6R6M4 530 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 IFNL3Q8IZI9 196 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 ACER1Q8TDN7 264 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 TRIM47Q96LD4 638 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 CCDC17Q96LX7 622 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 CABP5Q9NP86 173 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 HELLSQ9NRZ9 838 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 MORF4L1Q9UBU8 362 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 PLXNA1Q9UIW2 1896 aa10.33□□□□□ -0.76
ATG4D-202ENST00000585437 A0A1W2PRG0 241 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 RASA1P20936 1047 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 GCLCP48506 637 aaPredicted RBP10.32□□□□□ -0.76
ATG4D-202ENST00000585437 RGS19P49795 217 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 PRMT2P55345 433 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 KIF22Q14807 665 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 ARHGEF6Q15052 776 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 LBX2Q6XYB7 198 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 SIAH1Q8IUQ4 282 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 SMCR8Q8TEV9 937 aaPredicted RBP10.32□□□□□ -0.76
ATG4D-202ENST00000585437 ARMC5Q96C12 935 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 FAM227BQ96M60 508 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATG4D-202ENST00000585437 TMOD4Q9NZQ9 345 aa10.32□□□□□ -0.76
ATG4D-202ENST00000585437 ZNFX1Q9P2E3 1918 aaKnown RBP10.32□□□□□ -0.76
ATG4D-202ENST00000585437 MKI67P46013 3256 aaKnown RBP10.31□□□□□ -0.76
ATG4D-202ENST00000585437 IGKV6D-41A0A0C4DH26 115 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 VCAM1P19320 739 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 OSBPP22059 807 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 PSMC4P43686 418 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 TDO2P48775 406 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 HERVK_113P62684 666 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 CCDC129Q6ZRS4 1044 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 CLEC10AQ8IUN9 316 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 SRRDQ9UH36 339 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 TMX2Q9Y320 296 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 PTCH2Q9Y6C5 1203 aa10.31□□□□□ -0.76
ATG4D-202ENST00000585437 MPHOSPH10O00566 681 aaKnown RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 GSPT1P15170 499 aaKnown RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 IRX3P78415 501 aaPredicted RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 ICA1Q05084 483 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 NMIQ13287 307 aaPredicted RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 ALX1Q15699 326 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 ZYXQ15942 572 aaKnown RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 KIAA1755Q5JYT7 1200 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 VPS53Q5VIR6 699 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 ZNF589Q86UQ0 364 aaPredicted RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 ANKRD13CQ8N6S4 541 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 LPAR1Q92633 364 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 P2RX7Q99572 595 aaKnown RBP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 FEZ1Q99689 392 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 NACAP1Q9BZK3 213 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 NAPBQ9H115 298 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 TXNRD2Q9NNW7 524 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 ANAPC4Q9UJX5 808 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.3□□□□□ -0.76
ATG4D-202ENST00000585437 CCDC171Q6TFL3 1326 aa10.3□□□□□ -0.76
ATG4D-202ENST00000585437 MINDY4BA8MYZ0 360 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 APPP05067 770 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 SDSP20132 328 aa10.29□□□□□ -0.76
ATG4D-202ENST00000585437 FCGRTP55899 365 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms