RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 TMEM179Q6ZVK1 233 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 RALYLQ86SE5 291 aaKnown RBP9.87□□□□□ -0.83
ERBB2-216ENST00000584014 METTL16Q86W50 562 aaKnown RBP9.87□□□□□ -0.83
ERBB2-216ENST00000584014 REM2Q8IYK8 340 aaPredicted RBP9.87□□□□□ -0.83
ERBB2-216ENST00000584014 HHIPL1Q96JK4 782 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 CCDC17Q96LX7 622 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 ANAPC4Q9UJX5 808 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 TACC3Q9Y6A5 838 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 NEDD4P46934 1319 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 FAM155AB1AL88 458 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-216ENST00000584014 E7EWF7 191 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 NMT2O60551 498 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 KDM4AO75164 1064 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 SEC24BO95487 1268 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 EEF2P13639 858 aaKnown RBP9.86□□□□□ -0.83
ERBB2-216ENST00000584014 ZKSCAN1P17029 563 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-216ENST00000584014 MCCP23508 829 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 GTF2A2P52657 109 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 HMGCS2P54868 508 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 ICA1Q05084 483 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 NOGQ13253 232 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 PPIL2Q13356 520 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 SNAPC2Q13487 334 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 DGKZQ13574 1117 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 MTMR2Q13614 643 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 CHST3Q7LGC8 479 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 ZNF280CQ8ND82 737 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 ACER1Q8TDN7 264 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 STAG1Q8WVM7 1258 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 BBXQ8WY36 941 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-216ENST00000584014 ESR2Q92731 530 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 KRT23Q9C075 422 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 NBPF3Q9H094 633 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 ARHGEF10LQ9HCE6 1279 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 TMOD4Q9NZQ9 345 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 CLIP2Q9UDT6 1046 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 STX8Q9UNK0 236 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 TAF6LQ9Y6J9 622 aa9.86□□□□□ -0.83
ERBB2-216ENST00000584014 ZMYM6O95789 1325 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 LAMA4Q16363 1823 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 MANSC4A6NHS7 340 aaPredicted RBP9.85□□□□□ -0.83
ERBB2-216ENST00000584014 UNCXA6NJT0 531 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 ECM2O94769 699 aaPredicted RBP9.85□□□□□ -0.83
ERBB2-216ENST00000584014 ZBTB48P10074 688 aaPredicted RBP9.85□□□□□ -0.83
ERBB2-216ENST00000584014 GUCY1A2P33402 732 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 SPICE1Q8N0Z3 855 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 UBAC1Q9BSL1 405 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 CNNM2Q9H8M5 875 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 KANSL2Q9H9L4 492 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.85□□□□□ -0.83
ERBB2-216ENST00000584014 AFG3L2Q9Y4W6 797 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 ROBO3Q96MS0 1386 aa9.85□□□□□ -0.83
ERBB2-216ENST00000584014 USP17L10C9JJH3 530 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 ORC4O43929 436 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 CETPP11597 493 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 FGD1P98174 961 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 SREBF2Q12772 1141 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 NECTIN1Q15223 517 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 LRRC47Q8N1G4 583 aaKnown RBP9.84□□□□□ -0.83
ERBB2-216ENST00000584014 DNAJC5GQ8N7S2 189 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 NKX2-3Q8TAU0 364 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 CEP95Q96GE4 821 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 JAKMIP1Q96N16 626 aaKnown RBP9.84□□□□□ -0.83
ERBB2-216ENST00000584014 GINM1Q9NU53 330 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 ZSWIM5Q9P217 1185 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
ERBB2-216ENST00000584014 NAP1L2Q9ULW6 460 aaPredicted RBP9.84□□□□□ -0.83
ERBB2-216ENST00000584014 A0A1W2PRG0 241 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 ERICH2A1L162 156 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 CXCL11O14625 94 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 IFIT3O14879 490 aaKnown RBP9.83□□□□□ -0.84
ERBB2-216ENST00000584014 TRPA1O75762 1119 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 PCP11498 1178 aaKnown RBP9.83□□□□□ -0.84
ERBB2-216ENST00000584014 MAP2K2P36507 400 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 C8orf34Q49A92 452 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 OTUD7BQ6GQQ9 843 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 USP17L2Q6R6M4 530 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 STOX1Q6ZVD7 989 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 CYB5R4Q7L1T6 521 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 RASEFQ8IZ41 740 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 BRI3BPQ8WY22 251 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 WDR18Q9BV38 432 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
ERBB2-216ENST00000584014 USP26Q9BXU7 913 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 LRRC2Q9BYS8 371 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 SH2D4AQ9H788 454 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 GOPCQ9HD26 462 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 MYH4Q9Y623 1939 aa9.83□□□□□ -0.84
ERBB2-216ENST00000584014 PHIPQ8WWQ0 1821 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 C19orf81C9J6K1 198 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 PDHXO00330 501 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 PRC1O43663 620 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 TTLL1O95922 423 aa9.82□□□□□ -0.84
ERBB2-216ENST00000584014 CPA1P15085 419 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms