RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 AFG3L2Q9Y4W6 797 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 PLXNB2O15031 1838 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 FOCADQ5VW36 1801 aa9.66□□□□□ -0.86
SMCHD1-210ENST00000583800 MROH7-TTC4A0A0A0MT08 1334 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 TRIM75PA6NK02 468 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 FAM196BA6NMK8 535 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 FARP2O94887 1054 aaPredicted RBP9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 ELNP15502 786 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 FLT3LGP49771 235 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 TIMM10P62072 90 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 FASTKD5Q7L8L6 764 aaKnown RBP9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 SMCR8Q8TEV9 937 aaPredicted RBP9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 U2AF1L4Q8WU68 220 aaKnown RBP9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 DDX12PQ92771 950 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 LRCH3Q96II8 777 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 HTATIP2Q9BUP3 242 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 COPRSQ9NQ92 184 aa9.65□□□□□ -0.86
SMCHD1-210ENST00000583800 PDS5AQ29RF7 1337 aaKnown RBP9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 A0A1B0GUL7 405 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 TNPO2O14787 897 aaKnown RBP9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 ADCY3O60266 1144 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 INHAP05111 366 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 MAP3K10Q02779 954 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 EPAS1Q99814 870 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 API5Q9BZZ5 524 aaKnown RBP9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.64□□□□□ -0.87
SMCHD1-210ENST00000583800 DDX60LQ5H9U9 1706 aaKnown RBP9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 RAD21O60216 631 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 CTNND1O60716 968 aaKnown RBP9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 SGPL1O95470 568 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 MS4A1P11836 297 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 RHBDL3P58872 404 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 MECOMQ03112 1051 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 TFCP2Q12800 502 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 HIC1Q14526 733 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 TREML2Q5T2D2 321 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 PI16Q6UXB8 463 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 SLF2Q8IX21 1173 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 TRMT2AQ8IZ69 625 aaKnown RBP9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 ANKRD13CQ8N6S4 541 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 AGTPBP1Q9UPW5 1226 aa9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 RANBP2P49792 3224 aaKnown RBP9.63□□□□□ -0.87
SMCHD1-210ENST00000583800 COL2A1P02458 1487 aaPredicted RBP9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 GPR75-ASB3A0A0A6YYF3 556 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 SRGAP3O43295 1099 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 IRF5Q13568 498 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 MVPQ14764 893 aaKnown RBP9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 SPTY2D1Q68D10 685 aaPredicted RBP9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 TBC1D9Q6ZT07 1266 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 RGS22Q8NE09 1264 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 PXYLP1Q8TE99 480 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 NEUROD6Q96NK8 337 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 DEFB118Q96PH6 123 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 PRO3102Q9H379 93 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 HMG20BQ9P0W2 317 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 HDAC5Q9UQL6 1122 aa9.62□□□□□ -0.87
SMCHD1-210ENST00000583800 MYH1P12882 1939 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 TFRCP02786 760 aaKnown RBP9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 FECHP22830 423 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 HMGCS2P54868 508 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 SPP2Q13103 211 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 RRP1BQ14684 758 aaKnown RBP9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 FAM110CQ1W6H9 321 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 SH3D19Q5HYK7 790 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 DIS3LQ8TF46 1054 aaKnown RBP9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 COA7Q96BR5 231 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 NSUN4Q96CB9 384 aaKnown RBP9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 CCDC97Q96F63 343 aaPredicted RBP9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 OSBPL5Q9H0X9 879 aaPredicted RBP9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 PAK6Q9NQU5 681 aaPredicted RBP9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 PNMA3Q9UL41 463 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 AKAP2Q9Y2D5 859 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 NR2E3Q9Y5X4 410 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 FRMPD3Q5JV73 1810 aa9.61□□□□□ -0.87
SMCHD1-210ENST00000583800 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 GNAI3P08754 354 aa9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 CT47B1P0C2W7 299 aaPredicted RBP9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 ARID4AP29374 1257 aaPredicted RBP9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 RARSP54136 660 aaKnown RBP9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 MTX1Q13505 466 aa9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 SPATA5Q8NB90 893 aa9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 ZNF280CQ8ND82 737 aa9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 RAI14Q9P0K7 980 aa9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 TNNQ9UQP3 1299 aa9.6□□□□□ -0.87
SMCHD1-210ENST00000583800 LDHCP07864 332 aa9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 CAP2P40123 477 aa9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 MCAMP43121 646 aa9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 GSTO1P78417 241 aa9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 TRIM32Q13049 653 aa9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 TJAP1Q5JTD0 557 aa9.59□□□□□ -0.87
SMCHD1-210ENST00000583800 GORABQ5T7V8 394 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms