RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PTPRCP08575 1304 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 HLA-DOAP06340 250 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 ADCYAP1R1P41586 468 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 GRB14Q14449 540 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 RNF180Q86T96 592 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 LTBP2Q14767 1821 aa13.73□□□□□ -0.21
CASC3-208ENST00000583649 SYNGAP1Q96PV0 1343 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 CYBAP13498 195 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 TLE2Q04725 743 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 RASGRF1Q13972 1273 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 GORABQ5T7V8 394 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 ATG9AQ7Z3C6 839 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
CASC3-208ENST00000583649 FLRT1Q9NZU1 646 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 NDUFB9Q9Y6M9 179 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 MUC3AQ02505 3323 aa13.72□□□□□ -0.21
CASC3-208ENST00000583649 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 KIAA0355O15063 1070 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 PEX10O60683 326 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 RARBP10826 455 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 IGFBP4P22692 258 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 FERMT2Q96AC1 680 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 MTIF3Q9H2K0 278 aaKnown RBP13.71□□□□□ -0.21
CASC3-208ENST00000583649 MSRAQ9UJ68 235 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.21
CASC3-208ENST00000583649 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
CASC3-208ENST00000583649 LRRC41Q15345 812 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 RAB30Q15771 203 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 SH3RF1Q7Z6J0 888 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 C12orf42Q96LP6 360 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 LRP2BPQ9P2M1 347 aa13.7□□□□□ -0.22
CASC3-208ENST00000583649 CDH23Q9H251 3354 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 FRMPD3Q5JV73 1810 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 PQBP1O60828 265 aaKnown RBP13.69□□□□□ -0.22
CASC3-208ENST00000583649 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
CASC3-208ENST00000583649 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.229e-12■■□□□ 13.1
CASC3-208ENST00000583649 RRP1BQ14684 758 aaKnown RBP13.69□□□□□ -0.22
CASC3-208ENST00000583649 LBX2Q6XYB7 198 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 SLC44A5Q8NCS7 719 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 NPLOC4Q8TAT6 608 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 NSUN4Q96CB9 384 aaKnown RBP13.69□□□□□ -0.22
CASC3-208ENST00000583649 XPNPEP3Q9NQH7 507 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 HOXC10Q9NYD6 342 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 NRBP1Q9UHY1 535 aa13.69□□□□□ -0.22
CASC3-208ENST00000583649 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
CASC3-208ENST00000583649 MROH7Q68CQ1 1323 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 DNAH12Q6ZR08 3092 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 GDF11O95390 407 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 ADORA2AP29274 412 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
CASC3-208ENST00000583649 ANO1Q5XXA6 986 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 SPATA5Q8NB90 893 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 TRPV1Q8NER1 839 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 TOX2Q96NM4 488 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 CXXC1Q9P0U4 656 aaPredicted RBP13.68□□□□□ -0.22
CASC3-208ENST00000583649 PHF24Q9UPV7 400 aa13.68□□□□□ -0.22
CASC3-208ENST00000583649 ADORA1P30542 326 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 TIMM10P62072 90 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 ZYXQ15942 572 aaKnown RBP13.67□□□□□ -0.22
CASC3-208ENST00000583649 TMEM31Q5JXX7 168 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 PSRC1Q6PGN9 363 aaPredicted RBP13.67□□□□□ -0.22
CASC3-208ENST00000583649 METTL16Q86W50 562 aaKnown RBP13.67□□□□□ -0.22
CASC3-208ENST00000583649 TMEM199Q8N511 208 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 SHCBP1Q8NEM2 672 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 XAGE2Q96GT9 111 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 MROH8Q9H579 483 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 CABP5Q9NP86 173 aa13.67□□□□□ -0.22
CASC3-208ENST00000583649 A0A1B0GUL7 405 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 IGSF3O75054 1194 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 CNMDO75829 334 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 TIMP1P01033 207 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 GH2P01242 217 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
CASC3-208ENST00000583649 ANKRD33Q7Z3H0 272 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 CERS3Q8IU89 383 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 ABRAQ8N0Z2 381 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 MB21D1Q8N884 522 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
CASC3-208ENST00000583649 TGFBRAP1Q8WUH2 860 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 NEUROD6Q96NK8 337 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 KIAA1683Q9H0B3 1180 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 STARD7Q9NQZ5 370 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 RLFQ13129 1914 aa13.66□□□□□ -0.22
CASC3-208ENST00000583649 APBB1O00213 710 aa13.65□□□□□ -0.22
CASC3-208ENST00000583649 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
CASC3-208ENST00000583649 VCAM1P19320 739 aa13.65□□□□□ -0.22
CASC3-208ENST00000583649 EPHB4P54760 987 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms