RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 DNM1LO00429 736 aa15.08■□□□□ 0
TOP3A-215ENST00000583328 CNMDO75829 334 aa15.08■□□□□ 0
TOP3A-215ENST00000583328 TTC39AQ5SRH9 613 aa15.08■□□□□ 0
TOP3A-215ENST00000583328 ATP11BQ9Y2G3 1177 aa15.08■□□□□ 0
TOP3A-215ENST00000583328 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
TOP3A-215ENST00000583328 CYP2C19P33261 490 aa15.07■□□□□ 0
TOP3A-215ENST00000583328 SHHQ15465 462 aa15.07■□□□□ 0
TOP3A-215ENST00000583328 CCDC158Q5M9N0 1113 aa15.07■□□□□ 0
TOP3A-215ENST00000583328 CATSPERGQ6ZRH7 1159 aa15.07■□□□□ 0
TOP3A-215ENST00000583328 MAFAQ8NHW3 353 aaPredicted RBP15.07■□□□□ 0
TOP3A-215ENST00000583328 C12orf42Q96LP6 360 aa15.07■□□□□ 0
TOP3A-215ENST00000583328 SEMA6BQ9H3T3 888 aa15.07■□□□□ 0
TOP3A-215ENST00000583328 USP14P54578 494 aa15.06■□□□□ 0
TOP3A-215ENST00000583328 GJC2Q5T442 439 aaPredicted RBP15.06■□□□□ 0
TOP3A-215ENST00000583328 ADGRA1Q86SQ6 560 aa15.06■□□□□ 0
TOP3A-215ENST00000583328 ARRDC4Q8NCT1 418 aa15.06■□□□□ 0
TOP3A-215ENST00000583328 NPLOC4Q8TAT6 608 aa15.06■□□□□ 0
TOP3A-215ENST00000583328 PRDM5Q9NQX1 630 aaPredicted RBP15.06■□□□□ 0
TOP3A-215ENST00000583328 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
TOP3A-215ENST00000583328 GNAI2P04899 355 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 HOXC6P09630 235 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 DYNLL1P63167 89 aaKnown RBP15.05■□□□□ -0
TOP3A-215ENST00000583328 GRB14Q14449 540 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 RAB3GAP1Q15042 981 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 SLC39A5Q6ZMH5 540 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 DPP9Q86TI2 863 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 TRPV1Q8NER1 839 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 BTBD7Q9P203 1132 aa15.05■□□□□ -0
TOP3A-215ENST00000583328 KBTBD13C9JR72 458 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 CYP2E1P05181 493 aaPredicted RBP15.04■□□□□ -0
TOP3A-215ENST00000583328 VCAM1P19320 739 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 CYP7A1P22680 504 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 USP5P45974 858 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 C9orf50Q5SZB4 431 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
TOP3A-215ENST00000583328 BADQ92934 168 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 KIAA1683Q9H0B3 1180 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 CABP5Q9NP86 173 aa15.04■□□□□ -0
TOP3A-215ENST00000583328 ATAD5Q96QE3 1844 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 PNMA6EA0A0J9YXQ4 647 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 IGSF3O75054 1194 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 CYBAP13498 195 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 ZAP70P43403 619 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 ABCB5Q2M3G0 1257 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 CERKLQ49MI3 558 aaPredicted RBP15.03■□□□□ -0
TOP3A-215ENST00000583328 ANO1Q5XXA6 986 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 TATDN1Q6P1N9 297 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 LBX2Q6XYB7 198 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 ACER1Q8TDN7 264 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 MYLIPQ8WY64 445 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 ARHGAP45Q92619 1136 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 DBNDD2Q9BQY9 259 aa15.03■□□□□ -0
TOP3A-215ENST00000583328 RPAP3Q9H6T3 665 aaPredicted RBP15.03■□□□□ -0
TOP3A-215ENST00000583328 SPDYE16A6NNV3 312 aaPredicted RBP15.02■□□□□ -0
TOP3A-215ENST00000583328 RARSP54136 660 aaKnown RBP15.02■□□□□ -0
TOP3A-215ENST00000583328 SMAD3P84022 425 aaKnown RBP15.02■□□□□ -0
TOP3A-215ENST00000583328 OS9Q13438 667 aaPredicted RBP15.02■□□□□ -0
TOP3A-215ENST00000583328 TRIM60Q495X7 471 aa15.02■□□□□ -0
TOP3A-215ENST00000583328 TNNI3KQ59H18 835 aa15.02■□□□□ -0
TOP3A-215ENST00000583328 TTC6Q86TZ1 520 aa15.02■□□□□ -0
TOP3A-215ENST00000583328 GPR108Q9NPR9 543 aa15.02■□□□□ -0
TOP3A-215ENST00000583328 PIH1D3Q9NQM4 214 aaKnown RBP15.02■□□□□ -0
TOP3A-215ENST00000583328 PRDM6Q9NQX0 595 aa15.02■□□□□ -0
TOP3A-215ENST00000583328 SERPINB13Q9UIV8 391 aa15.02■□□□□ -0
TOP3A-215ENST00000583328 FPGT-TNNI3KV9GXZ4 949 aa15.02■□□□□ -0
TOP3A-215ENST00000583328 FOSL2P15408 326 aa15.01□□□□□ -0.01
TOP3A-215ENST00000583328 ADORA2AP29274 412 aa15.01□□□□□ -0.01
TOP3A-215ENST00000583328 OLFML2BQ68BL8 750 aa15.01□□□□□ -0.01
TOP3A-215ENST00000583328 MIGA1Q8NAN2 632 aa15.01□□□□□ -0.01
TOP3A-215ENST00000583328 SYMPKQ92797 1274 aaKnown RBP15.01□□□□□ -0.01
TOP3A-215ENST00000583328 TTYH1Q9H313 450 aaPredicted RBP15.01□□□□□ -0.01
TOP3A-215ENST00000583328 SEPT4O43236 478 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 STRNO43815 780 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 IDH1O75874 414 aaKnown RBP15□□□□□ -0.01
TOP3A-215ENST00000583328 IGHA2P01877 340 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 COG2Q14746 738 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 SH3RF1Q7Z6J0 888 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 CERS3Q8IU89 383 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 FERMT2Q96AC1 680 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 MOV10L1Q9BXT6 1211 aaKnown RBP15□□□□□ -0.01
TOP3A-215ENST00000583328 EHD4Q9H223 541 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 PDLIM7Q9NR12 457 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 SLC5A4Q9NY91 659 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 HOXC10Q9NYD6 342 aa15□□□□□ -0.01
TOP3A-215ENST00000583328 SIPA1L1O43166 1804 aa14.99□□□□□ -0.01
TOP3A-215ENST00000583328 TRIM43BA6NCK2 446 aa14.99□□□□□ -0.01
TOP3A-215ENST00000583328 IPO8O15397 1037 aaKnown RBP14.99□□□□□ -0.01
TOP3A-215ENST00000583328 ERCC3P19447 782 aa14.99□□□□□ -0.01
TOP3A-215ENST00000583328 SNX17Q15036 470 aa14.99□□□□□ -0.01
TOP3A-215ENST00000583328 PRAMEF19Q5SWL8 479 aa14.99□□□□□ -0.01
TOP3A-215ENST00000583328 TRIM43Q96BQ3 446 aaPredicted RBP14.99□□□□□ -0.01
TOP3A-215ENST00000583328 ZNF512BQ96KM6 892 aaPredicted RBP14.99□□□□□ -0.01
TOP3A-215ENST00000583328 SPATC1LQ9H0A9 340 aa14.99□□□□□ -0.01
TOP3A-215ENST00000583328 UNC80Q8N2C7 3258 aa14.99□□□□□ -0.01
TOP3A-215ENST00000583328 COBLO75128 1261 aa14.98□□□□□ -0.01
TOP3A-215ENST00000583328 LRRC41Q15345 812 aa14.98□□□□□ -0.01
TOP3A-215ENST00000583328 MAGEB6Q8N7X4 407 aa14.98□□□□□ -0.01
TOP3A-215ENST00000583328 RNPC3Q96LT9 517 aaKnown RBP14.98□□□□□ -0.01
TOP3A-215ENST00000583328 MPHOSPH10O00566 681 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms