RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 FAM43AQ8N2R8 423 aa25.68■■□□□ 1.7
TSEN54-208ENST00000583173 KANSL2Q9H9L4 492 aa25.68■■□□□ 1.7
TSEN54-208ENST00000583173 ATAD5Q96QE3 1844 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 C19orf81C9J6K1 198 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 CYP21A2P08686 494 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 TFAP4Q01664 338 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 IMMTQ16891 758 aaKnown RBP25.67■■□□□ 1.7
TSEN54-208ENST00000583173 FAM47AQ5JRC9 791 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 CASC1Q6TDU7 716 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 KIAA1211Q6ZU35 1233 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 FASTKD5Q7L8L6 764 aaKnown RBP25.67■■□□□ 1.7
TSEN54-208ENST00000583173 CFHR5Q9BXR6 569 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 KIAA1683Q9H0B3 1180 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 EMILIN3Q9NT22 766 aa25.67■■□□□ 1.7
TSEN54-208ENST00000583173 NOVP48745 357 aa25.66■■□□□ 1.7
TSEN54-208ENST00000583173 NECTIN1Q15223 517 aa25.66■■□□□ 1.7
TSEN54-208ENST00000583173 MFSD6Q6ZSS7 791 aa25.66■■□□□ 1.7
TSEN54-208ENST00000583173 ANKRD23Q86SG2 305 aa25.66■■□□□ 1.7
TSEN54-208ENST00000583173 ZCCHC17Q9NP64 241 aaKnown RBP25.66■■□□□ 1.7
TSEN54-208ENST00000583173 SAGE1Q9NXZ1 904 aa25.66■■□□□ 1.7
TSEN54-208ENST00000583173 RBM8AQ9Y5S9 174 aaKnown RBP25.66■■□□□ 1.7
TSEN54-208ENST00000583173 HSPA1AP0DMV8 641 aaKnown RBP25.65■■□□□ 1.7
TSEN54-208ENST00000583173 HSPA1BP0DMV9 641 aaKnown RBP25.65■■□□□ 1.7
TSEN54-208ENST00000583173 HMGCS2P54868 508 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 DGKZQ13574 1117 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 MTMR2Q13614 643 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 CLEC10AQ8IUN9 316 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 PROCA1Q8NCQ7 364 aaPredicted RBP25.65■■□□□ 1.7
TSEN54-208ENST00000583173 C12orf42Q96LP6 360 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 IL17RBQ9NRM6 502 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 NYAP2Q9P242 653 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 TAF6LQ9Y6J9 622 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 PLIN4Q96Q06 1357 aa25.65■■□□□ 1.7
TSEN54-208ENST00000583173 CA12O43570 354 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 TRPA1O75762 1119 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 ALDH1A1P00352 501 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 EEF2P13639 858 aaKnown RBP25.64■■□□□ 1.7
TSEN54-208ENST00000583173 MKL1Q969V6 931 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 R3HDMLQ9H3Y0 253 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 RNF41Q9H4P4 317 aaPredicted RBP25.64■■□□□ 1.7
TSEN54-208ENST00000583173 TCP11L1Q9NUJ3 509 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 MTMR4Q9NYA4 1195 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 TMX2Q9Y320 296 aa25.64■■□□□ 1.7
TSEN54-208ENST00000583173 GREB1LQ9C091 1923 aaPredicted RBP25.63■■□□□ 1.69
TSEN54-208ENST00000583173 OTUD7BQ6GQQ9 843 aa25.63■■□□□ 1.69
TSEN54-208ENST00000583173 USP17L2Q6R6M4 530 aa25.63■■□□□ 1.69
TSEN54-208ENST00000583173 ANO2Q9NQ90 1003 aa25.63■■□□□ 1.69
TSEN54-208ENST00000583173 SLC45A1Q9Y2W3 748 aa25.63■■□□□ 1.69
TSEN54-208ENST00000583173 NEDD4P46934 1319 aa25.63■■□□□ 1.69
TSEN54-208ENST00000583173 FOXN1O15353 648 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 RANBP6O60518 1105 aaKnown RBP25.62■■□□□ 1.69
TSEN54-208ENST00000583173 TSPY3P0CV98 308 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 TSPY8P0CW00 308 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 NT5C2P49902 561 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 ICA1Q05084 483 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 KIAA1755Q5JYT7 1200 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 TREML2Q5T2D2 321 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 CEP95Q96GE4 821 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 AGTPBP1Q9UPW5 1226 aa25.62■■□□□ 1.69
TSEN54-208ENST00000583173 PDHXO00330 501 aa25.61■■□□□ 1.69
TSEN54-208ENST00000583173 HOXA7P31268 230 aaPredicted RBP25.61■■□□□ 1.69
TSEN54-208ENST00000583173 GADL1Q6ZQY3 521 aa25.61■■□□□ 1.69
TSEN54-208ENST00000583173 PTPRFP10586 1907 aa25.61■■□□□ 1.69
TSEN54-208ENST00000583173 USP14P54578 494 aa25.6■■□□□ 1.69
TSEN54-208ENST00000583173 BEGAINQ9BUH8 593 aa25.6■■□□□ 1.69
TSEN54-208ENST00000583173 TSPY2A6NKD2 308 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 SLC27A2O14975 620 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 NMT2O60551 498 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 RRP12Q5JTH9 1297 aaKnown RBP25.59■■□□□ 1.69
TSEN54-208ENST00000583173 CREB3L3Q68CJ9 461 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 STOX1Q6ZVD7 989 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 KCNB2Q92953 911 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 ARHGEF10LQ9HCE6 1279 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 ZSWIM5Q9P217 1185 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 CLIP2Q9UDT6 1046 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 MYH8P13535 1937 aa25.59■■□□□ 1.69
TSEN54-208ENST00000583173 E7EWF7 191 aa25.58■■□□□ 1.69
TSEN54-208ENST00000583173 TBC1D8O95759 1140 aa25.58■■□□□ 1.69
TSEN54-208ENST00000583173 HSPA8P11142 646 aaKnown RBP25.58■■□□□ 1.69
TSEN54-208ENST00000583173 TSGA10IPQ3SY00 556 aa25.58■■□□□ 1.69
TSEN54-208ENST00000583173 ESR2Q92731 530 aa25.58■■□□□ 1.69
TSEN54-208ENST00000583173 VCPKMTQ9H867 229 aa25.58■■□□□ 1.69
TSEN54-208ENST00000583173 TMOD4Q9NZQ9 345 aa25.58■■□□□ 1.69
TSEN54-208ENST00000583173 SYNPO2Q9UMS6 1093 aa25.58■■□□□ 1.69
TSEN54-208ENST00000583173 B4E1Z4 1266 aa25.57■■□□□ 1.68
TSEN54-208ENST00000583173 EPB41L2O43491 1005 aaKnown RBP25.57■■□□□ 1.68
TSEN54-208ENST00000583173 TTLL1O95922 423 aa25.57■■□□□ 1.68
TSEN54-208ENST00000583173 CRHR2Q13324 411 aa25.57■■□□□ 1.68
TSEN54-208ENST00000583173 NOM1Q5C9Z4 860 aaKnown RBP25.57■■□□□ 1.68
TSEN54-208ENST00000583173 RCSD1Q6JBY9 416 aa25.57■■□□□ 1.68
TSEN54-208ENST00000583173 KRT23Q9C075 422 aa25.57■■□□□ 1.68
TSEN54-208ENST00000583173 TOMM22Q9NS69 142 aa25.57■■□□□ 1.68
TSEN54-208ENST00000583173 LAMA4Q16363 1823 aa25.57■■□□□ 1.68
TSEN54-208ENST00000583173 KDM4AO75164 1064 aa25.56■■□□□ 1.68
TSEN54-208ENST00000583173 ZYXQ15942 572 aaKnown RBP25.56■■□□□ 1.68
TSEN54-208ENST00000583173 ANKS1AQ92625 1134 aa25.56■■□□□ 1.68
TSEN54-208ENST00000583173 FEZ1Q99689 392 aa25.56■■□□□ 1.68
TSEN54-208ENST00000583173 CNNM2Q9H8M5 875 aa25.56■■□□□ 1.68
TSEN54-208ENST00000583173 TSKSQ9UJT2 592 aa25.56■■□□□ 1.68
TSEN54-208ENST00000583173 ADGRA2Q96PE1 1338 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms