RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	EMILIN3	Q9NT22	766 aa		11.65	□□□□□ -0.54
DDX42-215	ENST00000582985	OGDHL	Q9ULD0	1010 aa		11.65	□□□□□ -0.54
DDX42-215	ENST00000582985	RLBP1	P12271	317 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	USP5	P45974	858 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	PDE3A	Q14432	1141 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	TATDN1	Q6P1N9	297 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	POTEE	Q6S8J3	1075 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	GPR142	Q7Z601	462 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	CCAR1	Q8IX12	1150 aa	Known RBP	11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	TRMT44	Q8IYL2	757 aa	Known RBP	11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	MAGEB6	Q8N7X4	407 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	USP6NL	Q92738	828 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	PAGR1	Q9BTK6	254 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	PORCN	Q9H237	461 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	C11orf49	Q9H6J7	331 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	NDUFB9	Q9Y6M9	179 aa		11.64	□□□□□ -0.55
DDX42-215	ENST00000582985	DDX60L	Q5H9U9	1706 aa	Known RBP	11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	LAMA3	Q16787	3333 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	SOX1	O00570	391 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	ZKSCAN1	P17029	563 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	RGS2	P41220	211 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	CACNB2	Q08289	660 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	ZYX	Q15942	572 aa	Known RBP	11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	MORN1	Q5T089	497 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	PLEKHH3	Q7Z736	793 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	C12orf42	Q96LP6	360 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	FEZ1	Q99689	392 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	GDF15	Q99988	308 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	EHD4	Q9H223	541 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	ANTXR1	Q9H6X2	564 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	SERPINB13	Q9UIV8	391 aa		11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L15	C9J2P7	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L13	C9JLJ4	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L11	C9JVI0	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L18	D6R9N7	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L22	D6RA61	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L17	D6RBQ6	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L19	D6RCP7	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L20	D6RJB6	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	BMP8B	P34820	402 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	USP17L24	Q0WX57	530 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	MAP3K12	Q12852	859 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	RAB3GAP1	Q15042	981 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	CCL14	Q16627	93 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	CEP85	Q6P2H3	762 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	TMED8	Q6PL24	325 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	TTC6	Q86TZ1	520 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	AACS	Q86V21	672 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	LRCH3	Q96II8	777 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	APBA2	Q99767	749 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	RABGAP1	Q9Y3P9	1069 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	MYH1	P12882	1939 aa		11.62	□□□□□ -0.55
DDX42-215	ENST00000582985	PFAS	O15067	1338 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	CNMD	O75829	334 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	SYN1	P17600	705 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	CCND3	P30281	292 aa	Predicted RBP	11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	USP14	P54578	494 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	ABCB5	Q2M3G0	1257 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	CERKL	Q49MI3	558 aa	Predicted RBP	11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	CATSPERG	Q6ZRH7	1159 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	ERC1	Q8IUD2	1116 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	KIAA1683	Q9H0B3	1180 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	CWC22	Q9HCG8	908 aa	Known RBP	11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	EXOC6B	Q9Y2D4	811 aa		11.61	□□□□□ -0.55
DDX42-215	ENST00000582985	COL6A1	P12109	1028 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	VCAM1	P19320	739 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	SHMT1	P34896	483 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	MAGEA10	P43363	369 aa	Predicted RBP	11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	PLCD1	P51178	756 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	CCNA1	P78396	465 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	MAP2K5	Q13163	448 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	ACER1	Q8TDN7	264 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	RIOK1	Q9BRS2	568 aa	Known RBP	11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	CABP5	Q9NP86	173 aa		11.6	□□□□□ -0.55
DDX42-215	ENST00000582985	MAGEB6P1	A0A0J9YX57	407 aa		11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	GLRX3	O76003	335 aa	Known RBP	11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	GUCY1A2	P33402	732 aa		11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	WDR78	Q5VTH9	848 aa		11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	LBX2	Q6XYB7	198 aa		11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	EDC3	Q96F86	508 aa	Known RBP	11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	IL1RAPL2	Q9NP60	686 aa		11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	FLRT1	Q9NZU1	646 aa		11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	BTBD7	Q9P203	1132 aa		11.59	□□□□□ -0.55
DDX42-215	ENST00000582985	SLC15A5	A6NIM6	579 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	POLR3D	P05423	398 aa	Predicted RBP	11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	PDE6A	P16499	860 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	PTPRE	P23469	700 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	GABPA	Q06546	454 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	SEPT2	Q15019	361 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	TTF1	Q15361	905 aa	Predicted RBP	11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	LRRC26	Q2I0M4	334 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	HSP90AB4P	Q58FF6	505 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	SLC9C2	Q5TAH2	1124 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	MFSD14C	Q5VZR4	134 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	RHPN1	Q8TCX5	695 aa		11.58	□□□□□ -0.56
DDX42-215	ENST00000582985	PANK1	Q8TE04	598 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms