RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 TRPV1Q8NER1 839 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 C12orf42Q96LP6 360 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 FAM161BQ96MY7 647 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 NOL10Q9BSC4 688 aaKnown RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 SENP6Q9GZR1 1112 aaPredicted RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 SAP30BPQ9UHR5 308 aaKnown RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 TNNQ9UQP3 1299 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 RABGAP1Q9Y3P9 1069 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 NDUFB9Q9Y6M9 179 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 GBF1Q92538 1859 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 ZNF316A6NFI3 1004 aaPredicted RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 SLC15A5A6NIM6 579 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 GH2P01242 217 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 IGHA2P01877 340 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 HOXC6P09630 235 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 RARSP54136 660 aaKnown RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 ATN1P54259 1190 aaPredicted RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 RTP1P59025 263 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 G3BP1Q13283 466 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDK12-207ENST00000581963 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 CCAR1Q8IX12 1150 aaKnown RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 ARHGAP45Q92619 1136 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 EDC3Q96F86 508 aaKnown RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 DBNDD2Q9BQY9 259 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 TRIM34Q9BYJ4 488 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 PIH1D3Q9NQM4 214 aaKnown RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 BTBD7Q9P203 1132 aa7.53□□□□□ -1.2
CDK12-207ENST00000581963 DDX20Q9UHI6 824 aaKnown RBP7.53□□□□□ -1.2
CDK12-207ENST00000581963 SPDYE16A6NNV3 312 aaPredicted RBP7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L15C9J2P7 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L13C9JLJ4 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L11C9JVI0 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L18D6R9N7 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L22D6RA61 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L17D6RBQ6 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L19D6RCP7 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L20D6RJB6 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 DNM1LO00429 736 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 HLA-DOAP06340 250 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 CYBAP13498 195 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 VCAM1P19320 739 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 PTPREP23469 700 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 CYP2C19P33261 490 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 ZAP70P43403 619 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 CCNA1P78396 465 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 USP17L24Q0WX57 530 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 GRB14Q14449 540 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 TTC39AQ5SRH9 613 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 C9orf50Q5SZB4 431 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 ZNF697Q5TEC3 545 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 WDR78Q5VTH9 848 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 MFSD14CQ5VZR4 134 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 TATDN1Q6P1N9 297 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 LBX2Q6XYB7 198 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 CATSPERGQ6ZRH7 1159 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 ACER1Q8TDN7 264 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 LPAR1Q92633 364 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 LBHD1Q9BQE6 289 aaPredicted RBP7.52□□□□□ -1.21
CDK12-207ENST00000581963 CWC22Q9HCG8 908 aaKnown RBP7.52□□□□□ -1.21
CDK12-207ENST00000581963 GPR108Q9NPR9 543 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 RNF216Q9NWF9 866 aaPredicted RBP7.52□□□□□ -1.21
CDK12-207ENST00000581963 FPGT-TNNI3KV9GXZ4 949 aa7.52□□□□□ -1.21
CDK12-207ENST00000581963 MSCO60682 206 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 GLRX3O76003 335 aaKnown RBP7.51□□□□□ -1.21
CDK12-207ENST00000581963 GNAI2P04899 355 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 TRIM27P14373 513 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 CNGA1P29973 690 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 GUCY1A2P33402 732 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 USP14P54578 494 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 ATP2B2Q01814 1243 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 POLA2Q14181 598 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 RAB3GAP1Q15042 981 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 SHHQ15465 462 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 GJC2Q5T442 439 aaPredicted RBP7.51□□□□□ -1.21
CDK12-207ENST00000581963 ATF7IPQ6VMQ6 1270 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 MIGA1Q8NAN2 632 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 ZNF512BQ96KM6 892 aaPredicted RBP7.51□□□□□ -1.21
CDK12-207ENST00000581963 CDX2Q99626 313 aaPredicted RBP7.51□□□□□ -1.21
CDK12-207ENST00000581963 FEZ1Q99689 392 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 KIAA1683Q9H0B3 1180 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 EHD4Q9H223 541 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 TLR7Q9NYK1 1049 aaKnown RBP7.51□□□□□ -1.21
CDK12-207ENST00000581963 DBNLQ9UJU6 430 aaKnown RBP7.51□□□□□ -1.21
CDK12-207ENST00000581963 ATP11BQ9Y2G3 1177 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 IVNS1ABPQ9Y6Y0 642 aa7.51□□□□□ -1.21
CDK12-207ENST00000581963 GREB1LQ9C091 1923 aaPredicted RBP7.5□□□□□ -1.21
CDK12-207ENST00000581963 MYH4Q9Y623 1939 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 CYP7A1P22680 504 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 SHMT1P34896 483 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 EVX2Q03828 476 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 SNX17Q15036 470 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 ABCB5Q2M3G0 1257 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 TRIM60Q495X7 471 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 CCDC158Q5M9N0 1113 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 ANO1Q5XXA6 986 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 MAFAQ8NHW3 353 aaPredicted RBP7.5□□□□□ -1.21
CDK12-207ENST00000581963 MYLIPQ8WY64 445 aa7.5□□□□□ -1.21
CDK12-207ENST00000581963 MOV10L1Q9BXT6 1211 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms