RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SGPL1O95470 568 aa25.24■■□□□ 1.63
CCDC42-203ENST00000581598 GUCY1A2P33402 732 aa25.24■■□□□ 1.63
CCDC42-203ENST00000581598 FEZ1Q99689 392 aa25.24■■□□□ 1.63
CCDC42-203ENST00000581598 ARMT1Q9H993 441 aa25.24■■□□□ 1.63
CCDC42-203ENST00000581598 PAK6Q9NQU5 681 aaPredicted RBP25.24■■□□□ 1.63
CCDC42-203ENST00000581598 SWAP70Q9UH65 585 aa25.24■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L15C9J2P7 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L13C9JLJ4 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L11C9JVI0 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L18D6R9N7 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L22D6RA61 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L17D6RBQ6 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L19D6RCP7 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L20D6RJB6 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 SMARCA5O60264 1052 aaPredicted RBP25.23■■□□□ 1.63
CCDC42-203ENST00000581598 MBD4O95243 580 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 USP17L24Q0WX57 530 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 ZSCAN25Q6NSZ9 544 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 ECHDC1Q9NTX5 307 aa25.23■■□□□ 1.63
CCDC42-203ENST00000581598 MAPK4P31152 587 aa25.22■■□□□ 1.63
CCDC42-203ENST00000581598 ERVK-9P63128 1117 aa25.22■■□□□ 1.63
CCDC42-203ENST00000581598 ERVK-24P63145 666 aa25.22■■□□□ 1.63
CCDC42-203ENST00000581598 CATSPERGQ6ZRH7 1159 aa25.22■■□□□ 1.63
CCDC42-203ENST00000581598 ACER1Q8TDN7 264 aa25.22■■□□□ 1.63
CCDC42-203ENST00000581598 HMGCRP04035 888 aa25.21■■□□□ 1.63
CCDC42-203ENST00000581598 EVX2Q03828 476 aa25.21■■□□□ 1.63
CCDC42-203ENST00000581598 Q3C1V9 767 aa25.21■■□□□ 1.63
CCDC42-203ENST00000581598 HABP4Q5JVS0 413 aaKnown RBP25.21■■□□□ 1.63
CCDC42-203ENST00000581598 POTEEQ6S8J3 1075 aa25.21■■□□□ 1.63
CCDC42-203ENST00000581598 LBX2Q6XYB7 198 aa25.21■■□□□ 1.63
CCDC42-203ENST00000581598 SOCS4Q8WXH5 440 aa25.21■■□□□ 1.63
CCDC42-203ENST00000581598 RABGAP1Q9Y3P9 1069 aa25.21■■□□□ 1.63
CCDC42-203ENST00000581598 PRKAB2O43741 272 aa25.2■■□□□ 1.62
CCDC42-203ENST00000581598 XRCC5P13010 732 aaKnown RBP25.2■■□□□ 1.62
CCDC42-203ENST00000581598 VCAM1P19320 739 aa25.2■■□□□ 1.62
CCDC42-203ENST00000581598 SEPT2Q15019 361 aa25.2■■□□□ 1.62
CCDC42-203ENST00000581598 ZYXQ15942 572 aaKnown RBP25.2■■□□□ 1.62
CCDC42-203ENST00000581598 SLFNL1Q499Z3 407 aa25.2■■□□□ 1.62
CCDC42-203ENST00000581598 NUDT12Q9BQG2 462 aa25.2■■□□□ 1.62
CCDC42-203ENST00000581598 CYP2D6P10635 497 aa25.19■■□□□ 1.62
CCDC42-203ENST00000581598 C12orf60Q5U649 245 aa25.19■■□□□ 1.62
CCDC42-203ENST00000581598 TMEM179Q6ZVK1 233 aa25.19■■□□□ 1.62
CCDC42-203ENST00000581598 CRISPLD2Q9H0B8 497 aa25.19■■□□□ 1.62
CCDC42-203ENST00000581598 PEX10O60683 326 aa25.18■■□□□ 1.62
CCDC42-203ENST00000581598 AMOTL1Q8IY63 956 aa25.18■■□□□ 1.62
CCDC42-203ENST00000581598 USP6NLQ92738 828 aa25.18■■□□□ 1.62
CCDC42-203ENST00000581598 GPATCH3Q96I76 525 aa25.18■■□□□ 1.62
CCDC42-203ENST00000581598 HTATIP2Q9BUP3 242 aa25.18■■□□□ 1.62
CCDC42-203ENST00000581598 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.18■■□□□ 1.62
CCDC42-203ENST00000581598 CNMDO75829 334 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 FARP2O94887 1054 aaPredicted RBP25.17■■□□□ 1.62
CCDC42-203ENST00000581598 CHGBP05060 677 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 TRMT44Q8IYL2 757 aaKnown RBP25.17■■□□□ 1.62
CCDC42-203ENST00000581598 SLC44A5Q8NCS7 719 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 DDRGK1Q96HY6 314 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 CCDC17Q96LX7 622 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 DEFB118Q96PH6 123 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 PAGR1Q9BTK6 254 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 PUS7LQ9H0K6 701 aaKnown RBP25.17■■□□□ 1.62
CCDC42-203ENST00000581598 PORCNQ9H237 461 aa25.17■■□□□ 1.62
CCDC42-203ENST00000581598 RPTORQ8N122 1335 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 A0A1W2PRG0 241 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 MPHOSPH10O00566 681 aaKnown RBP25.16■■□□□ 1.62
CCDC42-203ENST00000581598 CEP290O15078 2479 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 CCNA1P78396 465 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 GPR142Q7Z601 462 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 PLEKHH3Q7Z736 793 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 KBTBD3Q8NAB2 608 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 TRIB2Q92519 343 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 DYNLL2Q96FJ2 89 aa25.16■■□□□ 1.62
CCDC42-203ENST00000581598 USP17L12C9JPN9 530 aa25.15■■□□□ 1.62
CCDC42-203ENST00000581598 USP17L21D6R901 530 aa25.15■■□□□ 1.62
CCDC42-203ENST00000581598 CYP2B6P20813 491 aa25.15■■□□□ 1.62
CCDC42-203ENST00000581598 MORN1Q5T089 497 aa25.15■■□□□ 1.62
CCDC42-203ENST00000581598 C16orf86Q6ZW13 317 aa25.15■■□□□ 1.62
CCDC42-203ENST00000581598 CCAR1Q8IX12 1150 aaKnown RBP25.15■■□□□ 1.62
CCDC42-203ENST00000581598 RPAP3Q9H6T3 665 aaPredicted RBP25.15■■□□□ 1.62
CCDC42-203ENST00000581598 SLC4A4Q9Y6R1 1079 aa25.15■■□□□ 1.62
CCDC42-203ENST00000581598 RLFQ13129 1914 aa25.14■■□□□ 1.62
CCDC42-203ENST00000581598 SPDYE16A6NNV3 312 aaPredicted RBP25.14■■□□□ 1.62
CCDC42-203ENST00000581598 TFRCP02786 760 aaKnown RBP25.14■■□□□ 1.62
CCDC42-203ENST00000581598 CDK8P49336 464 aa25.14■■□□□ 1.62
CCDC42-203ENST00000581598 MAP3K21Q5TCX8 1036 aa25.14■■□□□ 1.62
CCDC42-203ENST00000581598 HMX1Q9NP08 348 aaPredicted RBP25.14■■□□□ 1.62
CCDC42-203ENST00000581598 PCDHB15Q9Y5E8 787 aa25.14■■□□□ 1.62
CCDC42-203ENST00000581598 RGS2P41220 211 aa25.13■■□□□ 1.61
CCDC42-203ENST00000581598 ANKLE1Q8NAG6 615 aa25.13■■□□□ 1.61
CCDC42-203ENST00000581598 LPAR1Q92633 364 aa25.13■■□□□ 1.61
CCDC42-203ENST00000581598 STRBPQ96SI9 672 aaKnown RBP25.13■■□□□ 1.61
CCDC42-203ENST00000581598 SH2D4AQ9H788 454 aa25.13■■□□□ 1.61
CCDC42-203ENST00000581598 ARPP21Q9UBL0 812 aaPredicted RBP25.13■■□□□ 1.61
CCDC42-203ENST00000581598 TMX2Q9Y320 296 aa25.13■■□□□ 1.61
CCDC42-203ENST00000581598 TTC41PQ6P2S7 1318 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 A0A0G2JMZ2 1700 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 H0YGN5 161 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 GLRX3O76003 335 aaKnown RBP25.12■■□□□ 1.61
CCDC42-203ENST00000581598 ZFYP08048 801 aaPredicted RBP25.12■■□□□ 1.61
CCDC42-203ENST00000581598 AKR1B1P15121 316 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 TRIM32Q13049 653 aa25.12■■□□□ 1.61
CCDC42-203ENST00000581598 GIMAP6Q6P9H5 292 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms