RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 SETDB2Q96T68 719 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 C2orf49Q9BVC5 232 aaPredicted RBP7.56□□□□□ -1.2
PTPRM-213ENST00000580949 RTL9Q8NET4 1388 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 ABCC12Q96J65 1359 aa7.56□□□□□ -1.2
PTPRM-213ENST00000580949 CDC14CA4D256 554 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 GYS1P13807 737 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 TM4SF1P30408 202 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 TXLNAP40222 546 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 DBN1Q16643 649 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 CCDC152Q4G0S7 254 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 METTL24Q5JXM2 366 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 SH3PXD2AQ5TCZ1 1133 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 C1orf53Q5VUE5 145 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 CASC1Q6TDU7 716 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 NBPF5PQ86XG9 351 aaPredicted RBP7.55□□□□□ -1.2
PTPRM-213ENST00000580949 CNTROBQ8N137 903 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 ZNF837Q96EG3 531 aaPredicted RBP7.55□□□□□ -1.2
PTPRM-213ENST00000580949 HAUS7Q99871 368 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 NUCKS1Q9H1E3 243 aaKnown RBP7.55□□□□□ -1.2
PTPRM-213ENST00000580949 CNNM1Q9NRU3 951 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 GPC6Q9Y625 555 aaPredicted RBP7.55□□□□□ -1.2
PTPRM-213ENST00000580949 ANKRD36CQ5JPF3 1778 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
PTPRM-213ENST00000580949 COL4A1P02462 1669 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 ZNF609O15014 1411 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 WTIPA6NIX2 430 aaPredicted RBP7.54□□□□□ -1.2
PTPRM-213ENST00000580949 SNAP23O00161 211 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 SGSM2O43147 1006 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 PDE8BO95263 885 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 CHGBP05060 677 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 HSP90B1P14625 803 aaKnown RBP7.54□□□□□ -1.2
PTPRM-213ENST00000580949 FGFR2P21802 821 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 SSFA2P28290 1259 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 OCLNQ16625 522 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 ATP2B3Q16720 1220 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 EFHC2Q5JST6 749 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 LCE2CQ5TA81 110 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 TPTE2Q6XPS3 522 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 FAM227BQ96M60 508 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 NYXQ9GZU5 481 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 RUBCNLQ9H714 662 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 AKAP2Q9Y2D5 859 aa7.54□□□□□ -1.2
PTPRM-213ENST00000580949 TUBGCP6Q96RT7 1819 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 TMEM88BA6NKF7 163 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 TAF5LO75529 589 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 REC8O95072 547 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 DDR1Q08345 913 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 NMIQ13287 307 aaPredicted RBP7.53□□□□□ -1.2
PTPRM-213ENST00000580949 CWC27Q6UX04 472 aaKnown RBP7.53□□□□□ -1.2
PTPRM-213ENST00000580949 DDX46Q7L014 1031 aaKnown RBP7.53□□□□□ -1.2
PTPRM-213ENST00000580949 NLRP8Q86W28 1048 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 COL23A1Q86Y22 540 aaPredicted RBP7.53□□□□□ -1.2
PTPRM-213ENST00000580949 CELF1Q92879 486 aaKnown RBP7.53□□□□□ -1.2
PTPRM-213ENST00000580949 PRIMPOLQ96LW4 560 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 ZIC5Q96T25 663 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
PTPRM-213ENST00000580949 LSG1Q9H089 658 aaKnown RBP7.53□□□□□ -1.2
PTPRM-213ENST00000580949 USTQ9Y2C2 406 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
PTPRM-213ENST00000580949 MROH5Q6ZUA9 1318 aa7.52□□□□□ -1.2
PTPRM-213ENST00000580949 TAF1LQ8IZX4 1826 aa7.52□□□□□ -1.2
PTPRM-213ENST00000580949 SCN7AQ01118 1682 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 A0A0D9SFI3 127 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 GOLIM4O00461 696 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PRMT3O60678 531 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 EIF5BO60841 1220 aaKnown RBP7.52□□□□□ -1.21
PTPRM-213ENST00000580949 THBS1P07996 1170 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 IFIT1P09914 478 aaKnown RBP7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PHKA1P46020 1223 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PTH1RQ03431 593 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 CHRNDQ07001 517 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 ARSJQ5FYB0 599 aaPredicted RBP7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PRR5LQ6MZQ0 368 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 FOXR1Q6PIV2 292 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 SLC51AQ86UW1 340 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 GPR161Q8N6U8 529 aaKnown RBP7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPRM-213ENST00000580949 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 CAMKK2Q96RR4 588 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 MPHOSPH8Q99549 860 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 FSD1Q9BTV5 496 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PHACTR1Q9C0D0 580 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 ANO2Q9NQ90 1003 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 DIAPH3Q9NSV4 1193 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PAG1Q9NWQ8 432 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 TFCP2L1Q9NZI6 479 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 CXXC1Q9P0U4 656 aaPredicted RBP7.52□□□□□ -1.21
PTPRM-213ENST00000580949 PALD1Q9ULE6 856 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 EP400Q96L91 3159 aa7.52□□□□□ -1.21
PTPRM-213ENST00000580949 CARMIL3Q8ND23 1372 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 A0A1W2PNR3 127 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 POLRMTO00411 1230 aaKnown RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 SERPINB2P05120 415 aa7.51□□□□□ -1.21
PTPRM-213ENST00000580949 IGHMBP2P38935 993 aaKnown RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 RPS8P62241 208 aaKnown RBP7.51□□□□□ -1.21
PTPRM-213ENST00000580949 UBAP2LQ14157 1087 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms