RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 USP17L20D6RJB6 530 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 PRKAB2O43741 272 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 JAG1P78504 1218 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 PRKCZQ05513 592 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 USP17L24Q0WX57 530 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 SH3TC2Q8TF17 1288 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 C12orf42Q96LP6 360 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 NACAP1Q9BZK3 213 aa24.13■■□□□ 1.45
SMG8-204ENST00000580498 BAZ2AQ9UIF9 1905 aaKnown RBP24.13■■□□□ 1.45
SMG8-204ENST00000580498 APPP05067 770 aa24.12■■□□□ 1.45
SMG8-204ENST00000580498 HERVK_113P62684 666 aa24.12■■□□□ 1.45
SMG8-204ENST00000580498 C12orf60Q5U649 245 aa24.12■■□□□ 1.45
SMG8-204ENST00000580498 GPRC5AQ8NFJ5 357 aa24.12■■□□□ 1.45
SMG8-204ENST00000580498 RBBP6Q7Z6E9 1792 aaKnown RBP24.11■■□□□ 1.45
SMG8-204ENST00000580498 TDO2P48775 406 aa24.11■■□□□ 1.45
SMG8-204ENST00000580498 CCNA1P78396 465 aa24.11■■□□□ 1.45
SMG8-204ENST00000580498 SEPT2Q15019 361 aa24.11■■□□□ 1.45
SMG8-204ENST00000580498 SHROOM1Q2M3G4 852 aaPredicted RBP24.11■■□□□ 1.45
SMG8-204ENST00000580498 SLFNL1Q499Z3 407 aa24.11■■□□□ 1.45
SMG8-204ENST00000580498 NKX2-3Q8TAU0 364 aa24.11■■□□□ 1.45
SMG8-204ENST00000580498 STRBPQ96SI9 672 aaKnown RBP24.11■■□□□ 1.45
SMG8-204ENST00000580498 MORF4L1Q9UBU8 362 aa24.11■■□□□ 1.45
SMG8-204ENST00000580498 MYCP01106 439 aaPredicted RBP24.1■■□□□ 1.45
SMG8-204ENST00000580498 CYP2D6P10635 497 aa24.1■■□□□ 1.45
SMG8-204ENST00000580498 CTGFP29279 349 aa24.1■■□□□ 1.45
SMG8-204ENST00000580498 FLT3LGP49771 235 aa24.1■■□□□ 1.45
SMG8-204ENST00000580498 IRF5Q13568 498 aa24.1■■□□□ 1.45
SMG8-204ENST00000580498 P2RX7Q99572 595 aaKnown RBP24.1■■□□□ 1.45
SMG8-204ENST00000580498 EMILIN3Q9NT22 766 aa24.1■■□□□ 1.45
SMG8-204ENST00000580498 KIAA0100Q14667 2235 aaKnown RBP24.09■■□□□ 1.45
SMG8-204ENST00000580498 GPAA1O43292 621 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 ADCY3O60266 1144 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 CDK8P49336 464 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 ICA1Q05084 483 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 C16orf86Q6ZW13 317 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 PI4K2BQ8TCG2 481 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 PXYLP1Q8TE99 480 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 DYNLL2Q96FJ2 89 aa24.09■■□□□ 1.45
SMG8-204ENST00000580498 POTEFA5A3E0 1075 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 SLC3A2P08195 630 aaKnown RBP24.08■■□□□ 1.45
SMG8-204ENST00000580498 MAPK4P31152 587 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 SBK1Q52WX2 424 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 CTR9Q6PD62 1173 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 SLC44A5Q8NCS7 719 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 LPAR1Q92633 364 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 PAGR1Q9BTK6 254 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 MKNK2Q9HBH9 465 aa24.08■■□□□ 1.45
SMG8-204ENST00000580498 MINDY4BA8MYZ0 360 aa24.07■■□□□ 1.44
SMG8-204ENST00000580498 VCAM1P19320 739 aa24.07■■□□□ 1.44
SMG8-204ENST00000580498 SOCS4Q8WXH5 440 aa24.07■■□□□ 1.44
SMG8-204ENST00000580498 OSBP2Q969R2 916 aa24.07■■□□□ 1.44
SMG8-204ENST00000580498 EVI5LQ96CN4 794 aa24.07■■□□□ 1.44
SMG8-204ENST00000580498 GABRQQ9UN88 632 aa24.07■■□□□ 1.44
SMG8-204ENST00000580498 RABGAP1Q9Y3P9 1069 aa24.07■■□□□ 1.44
SMG8-204ENST00000580498 CAPN2P17655 700 aa24.06■■□□□ 1.44
SMG8-204ENST00000580498 CATSPERGQ6ZRH7 1159 aa24.06■■□□□ 1.44
SMG8-204ENST00000580498 ACER1Q8TDN7 264 aa24.06■■□□□ 1.44
SMG8-204ENST00000580498 RPAP3Q9H6T3 665 aaPredicted RBP24.06■■□□□ 1.44
SMG8-204ENST00000580498 KANSL2Q9H9L4 492 aa24.06■■□□□ 1.44
SMG8-204ENST00000580498 PATL2C9JE40 543 aaKnown RBP24.05■■□□□ 1.44
SMG8-204ENST00000580498 CHGBP05060 677 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 ERVK-9P63128 1117 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 ERVK-24P63145 666 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 ATP2B2Q01814 1243 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 OTUD7AQ8TE49 926 aaPredicted RBP24.05■■□□□ 1.44
SMG8-204ENST00000580498 NUDT12Q9BQG2 462 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 TANGO6Q9C0B7 1094 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 RNF208Q9H0X6 261 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 HOXC10Q9NYD6 342 aa24.05■■□□□ 1.44
SMG8-204ENST00000580498 CYP2D7A0A087X1C5 515 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 GSG1L2A8MUP6 293 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 AKR1B1P15121 316 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 EN2P19622 333 aaPredicted RBP24.04■■□□□ 1.44
SMG8-204ENST00000580498 GUCY1A2P33402 732 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 TICAM2Q86XR7 235 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 TRMT44Q8IYL2 757 aaKnown RBP24.04■■□□□ 1.44
SMG8-204ENST00000580498 NAPBQ9H115 298 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 GOPCQ9HD26 462 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 STAP2Q9UGK3 403 aa24.04■■□□□ 1.44
SMG8-204ENST00000580498 CCL5P13501 91 aa24.03■■□□□ 1.44
SMG8-204ENST00000580498 PDE1AP54750 535 aa24.03■■□□□ 1.44
SMG8-204ENST00000580498 ZNF444Q8N0Y2 327 aaPredicted RBP24.03■■□□□ 1.44
SMG8-204ENST00000580498 IVNS1ABPQ9Y6Y0 642 aa24.03■■□□□ 1.44
SMG8-204ENST00000580498 M0R2C6 588 aa24.02■■□□□ 1.44
SMG8-204ENST00000580498 PDE4BQ07343 736 aa24.02■■□□□ 1.44
SMG8-204ENST00000580498 COG2Q14746 738 aa24.02■■□□□ 1.44
SMG8-204ENST00000580498 WDR78Q5VTH9 848 aa24.02■■□□□ 1.44
SMG8-204ENST00000580498 LNPKQ9C0E8 428 aa24.02■■□□□ 1.44
SMG8-204ENST00000580498 TMX2Q9Y320 296 aa24.02■■□□□ 1.44
SMG8-204ENST00000580498 PDE4DIPQ5VU43 2346 aa24.02■■□□□ 1.44
SMG8-204ENST00000580498 TRIM6-TRIM34B2RNG4 842 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 HMGCRP04035 888 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 INHAP05111 366 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 GJB1P08034 283 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 EVX2Q03828 476 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 ZMYM1Q5SVZ6 1142 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 B4GALNT3Q6L9W6 998 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 LBX2Q6XYB7 198 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 SMC5Q8IY18 1101 aa24.01■■□□□ 1.43
SMG8-204ENST00000580498 EXOC6Q8TAG9 804 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms