RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 MYBBP1AQ9BQG0 1328 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-213ENST00000580446 SEPT4O43236 478 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 PGK1P00558 417 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 SLC5A1P13866 664 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 GRB14Q14449 540 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 RASIP1Q5U651 963 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 DZIP1Q86YF9 867 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 FBXL18Q96ME1 805 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 WDR18Q9BV38 432 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 EMILIN3Q9NT22 766 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 BTBD7Q9P203 1132 aa17.62■□□□□ 0.41
CSNK1D-213ENST00000580446 A0A1W2PQ45 241 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 A0A1W2PQY0 241 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 GLRX3O76003 335 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 IGHA2P01877 340 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 HOXC6P09630 235 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 RHBDL3P58872 404 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 SLC4A10Q6U841 1118 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 CERS4Q9HA82 394 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 IVNS1ABPQ9Y6Y0 642 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 LRRC37A2A6NM11 1700 aa17.61■□□□□ 0.41
CSNK1D-213ENST00000580446 PI4K2BG5E9Z4 385 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 APBB1O00213 710 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 TIMP1P01033 207 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 PHKA1P46020 1223 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 RAB30Q15771 203 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 DPP9Q86TI2 863 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 TBC1D2Q9BYX2 928 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 PPP1R12CQ9BZL4 782 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 ABCF2Q9UG63 623 aa17.6■□□□□ 0.41
CSNK1D-213ENST00000580446 KIF16BQ96L93 1317 aa17.59■□□□□ 0.41
CSNK1D-213ENST00000580446 ADORA2AP29274 412 aa17.59■□□□□ 0.41
CSNK1D-213ENST00000580446 PPP2R2DQ66LE6 453 aa17.59■□□□□ 0.41
CSNK1D-213ENST00000580446 XPNPEP3Q9NQH7 507 aa17.59■□□□□ 0.41
CSNK1D-213ENST00000580446 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
CSNK1D-213ENST00000580446 ATAD5Q96QE3 1844 aa17.58■□□□□ 0.41
CSNK1D-213ENST00000580446 PRR33A8MZF0 331 aa17.58■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L10C9JJH3 530 aa17.58■□□□□ 0.4
CSNK1D-213ENST00000580446 CCNA1P78396 465 aa17.58■□□□□ 0.4
CSNK1D-213ENST00000580446 MFSD5Q6N075 450 aa17.58■□□□□ 0.4
CSNK1D-213ENST00000580446 HERVK_113Q902F9 699 aa17.58■□□□□ 0.4
CSNK1D-213ENST00000580446 TBX21Q9UL17 535 aa17.58■□□□□ 0.4
CSNK1D-213ENST00000580446 MROH7-TTC4A0A0A0MT08 1334 aa17.57■□□□□ 0.4
CSNK1D-213ENST00000580446 EPOPA6NHQ4 379 aa17.57■□□□□ 0.4
CSNK1D-213ENST00000580446 COBLO75128 1261 aa17.57■□□□□ 0.4
CSNK1D-213ENST00000580446 PPIGQ13427 754 aaKnown RBP eCLIP17.57■□□□□ 0.44e-12■■■□□ 15.2
CSNK1D-213ENST00000580446 ZNF384Q8TF68 577 aa17.57■□□□□ 0.4
CSNK1D-213ENST00000580446 LPIN2Q92539 896 aa17.57■□□□□ 0.4
CSNK1D-213ENST00000580446 MTCH2Q9Y6C9 303 aa17.57■□□□□ 0.4
CSNK1D-213ENST00000580446 SALL1Q9NSC2 1324 aa17.56■□□□□ 0.4
CSNK1D-213ENST00000580446 DCDC2CA8MYV0 355 aa17.56■□□□□ 0.4
CSNK1D-213ENST00000580446 ADORA1P30542 326 aa17.56■□□□□ 0.4
CSNK1D-213ENST00000580446 GTF3C2Q8WUA4 911 aaPredicted RBP17.56■□□□□ 0.4
CSNK1D-213ENST00000580446 DNAJC18Q9H819 358 aa17.56■□□□□ 0.4
CSNK1D-213ENST00000580446 MYH13Q9UKX3 1938 aa17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 TAL1P17542 331 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 RALBP1Q15311 655 aa17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 OLFML2BQ68BL8 750 aa17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 OTOP2Q7RTS6 562 aa17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 WDFY4Q6ZS81 3184 aa17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 PRRC2BQ5JSZ5 2229 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-213ENST00000580446 CYP2C18P33260 490 aa17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 IRX5P78411 483 aaPredicted RBP17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 MECOMQ03112 1051 aa17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 RABL6Q3YEC7 729 aaPredicted RBP17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 ANKRD33Q7Z3H0 272 aa17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 SRCIN1Q9C0H9 1055 aa17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 GNL3LQ9NVN8 582 aaKnown RBP17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 ZBTB21Q9ULJ3 1066 aa17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 MYH2Q9UKX2 1941 aa17.54■□□□□ 0.4
CSNK1D-213ENST00000580446 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 ASNSP08243 561 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 RARBP10826 455 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 RASGRF1Q13972 1273 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 PSRC1Q6PGN9 363 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L2Q6R6M4 530 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 HLA-CQ95604 372 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 FEZ1Q99689 392 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 MOV10L1Q9BXT6 1211 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 SIL1Q9H173 461 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 STARD7Q9NQZ5 370 aa17.53■□□□□ 0.4
CSNK1D-213ENST00000580446 TRANK1O15050 2925 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 ALDH1L1O75891 902 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
CSNK1D-213ENST00000580446 RNF180Q86T96 592 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms