RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FAM198AQ9UFP1 575 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 PLIN4Q96Q06 1357 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 NFKBIEO00221 500 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 DEXIO95424 95 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 VIL1P09327 827 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 SLURP2P0DP57 97 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CEBPZQ03701 1054 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TCP10Q12799 353 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 TDRD3Q9H7E2 651 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 SERPINB13Q9UIV8 391 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CD2APQ9Y5K6 639 aa17.22■□□□□ 0.35
CDK5RAP3-218ENST00000580391 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
CDK5RAP3-218ENST00000580391 RGS22Q8NE09 1264 aa17.21■□□□□ 0.35
CDK5RAP3-218ENST00000580391 WASF1Q92558 559 aa17.21■□□□□ 0.35
CDK5RAP3-218ENST00000580391 GMLQ99445 158 aa17.21■□□□□ 0.35
CDK5RAP3-218ENST00000580391 IDI2Q9BXS1 227 aa17.21■□□□□ 0.35
CDK5RAP3-218ENST00000580391 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
CDK5RAP3-218ENST00000580391 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
CDK5RAP3-218ENST00000580391 hCG_1642624A0A1W2PR95 340 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 HLA-DOAP06340 250 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 PRMT6Q96LA8 375 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 AKR1B1P15121 316 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SHMT1P34896 483 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 TRIM29Q14134 588 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 RASGRP2Q7LDG7 609 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 CEP95Q96GE4 821 aa17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDK5RAP3-218ENST00000580391 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 PKN1Q16512 942 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SH3BP5LQ7L8J4 393 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 NLGN2Q8NFZ4 835 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SHISA4Q96DD7 197 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 DNAJC18Q9H819 358 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 CFAP45Q9UL16 551 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 KCNJ14Q9UNX9 436 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 MTMR7Q9Y216 660 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 MYSM1Q5VVJ2 828 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 GAS2L3Q86XJ1 694 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 ZNF396Q96N95 335 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SWAP70Q9UH65 585 aa17.19■□□□□ 0.34
CDK5RAP3-218ENST00000580391 FSD2A1L4K1 749 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 FAM196BA6NMK8 535 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 PRPF3O43395 683 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 RASSF7Q02833 373 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 CXCL9Q07325 125 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 GRM4Q14833 912 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 PGBD1Q96JS3 809 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 EHD4Q9H223 541 aa17.18■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 MMP1P03956 469 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 KIF5BP33176 963 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 V9GY48 417 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 NOVP48745 357 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 ZNF445P59923 1031 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 ATL3Q6DD88 541 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 ZSCAN29Q8IWY8 852 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 MAP3K14Q99558 947 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 DHX36Q9H2U1 1008 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 HDAC9Q9UKV0 1011 aa17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 COL2A1P02458 1487 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-218ENST00000580391 ATRNL1Q5VV63 1379 aa17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 IGKV6D-41A0A0C4DH26 115 aa17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 CLRN2A0PK11 232 aa17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SYCE3A1L190 88 aa17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 DIS3L2Q8IYB7 885 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 RCOR1Q9UKL0 485 aa17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 UTRNP46939 3433 aa17.16■□□□□ 0.34
CDK5RAP3-218ENST00000580391 TOP1P11387 765 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.346e-7■■■□□ 18.2
CDK5RAP3-218ENST00000580391 EIF6P56537 245 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 CIAPIN1Q6FI81 312 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 AGBL3Q8NEM8 1001 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 PIBF1Q8WXW3 757 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 SYAP1Q96A49 352 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 CLIC4Q9Y696 253 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 BTBD18B2RXH4 712 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 ENTPD3O75355 529 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 LIG1P18858 919 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 PRELPP51888 382 aa17.15■□□□□ 0.34
CDK5RAP3-218ENST00000580391 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms