RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PLCD1P51178 756 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 HMGCS2P54868 508 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 TATDN1Q6P1N9 297 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 DEFB118Q96PH6 123 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 FSD1Q9BTV5 496 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 LNPKQ9C0E8 428 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 TAOK2Q9UL54 1235 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 NR2E3Q9Y5X4 410 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 SLC4A4Q9Y6R1 1079 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 TFRCP02786 760 aaKnown RBP29.84■■■□□ 2.37
CDC42EP4-205ENST00000580315 GCLCP48506 637 aaPredicted RBP29.84■■■□□ 2.37
CDC42EP4-205ENST00000580315 PDE1AP54750 535 aa29.84■■■□□ 2.37
CDC42EP4-205ENST00000580315 IRX6P78412 446 aaPredicted RBP29.84■■■□□ 2.37
CDC42EP4-205ENST00000580315 PAK6Q9NQU5 681 aaPredicted RBP29.84■■■□□ 2.37
CDC42EP4-205ENST00000580315 ZBTB21Q9ULJ3 1066 aa29.84■■■□□ 2.37
CDC42EP4-205ENST00000580315 CAPN2P17655 700 aa29.83■■■□□ 2.37
CDC42EP4-205ENST00000580315 WDR18Q9BV38 432 aa29.83■■■□□ 2.37
CDC42EP4-205ENST00000580315 PRO3102Q9H379 93 aa29.83■■■□□ 2.37
CDC42EP4-205ENST00000580315 PABPC4Q13310 644 aaKnown RBP eCLIP29.82■■■□□ 2.36
CDC42EP4-205ENST00000580315 CERKLQ49MI3 558 aaPredicted RBP29.82■■■□□ 2.36
CDC42EP4-205ENST00000580315 CHD1LQ86WJ1 897 aa29.82■■■□□ 2.36
CDC42EP4-205ENST00000580315 ASCC2Q9H1I8 757 aaPredicted RBP29.82■■■□□ 2.36
CDC42EP4-205ENST00000580315 MYH1P12882 1939 aa29.82■■■□□ 2.36
CDC42EP4-205ENST00000580315 NUCB1Q02818 461 aa29.81■■■□□ 2.36
CDC42EP4-205ENST00000580315 SH3D19Q5HYK7 790 aa29.81■■■□□ 2.36
CDC42EP4-205ENST00000580315 OSBP2Q969R2 916 aa29.81■■■□□ 2.36
CDC42EP4-205ENST00000580315 STRBPQ96SI9 672 aaKnown RBP29.81■■■□□ 2.36
CDC42EP4-205ENST00000580315 CRISPLD2Q9H0B8 497 aa29.81■■■□□ 2.36
CDC42EP4-205ENST00000580315 GH2P01242 217 aa29.8■■■□□ 2.36
CDC42EP4-205ENST00000580315 JAG1P78504 1218 aa29.8■■■□□ 2.36
CDC42EP4-205ENST00000580315 GABPAQ06546 454 aa29.8■■■□□ 2.36
CDC42EP4-205ENST00000580315 CABP5Q9NP86 173 aa29.8■■■□□ 2.36
CDC42EP4-205ENST00000580315 SWAP70Q9UH65 585 aa29.8■■■□□ 2.36
CDC42EP4-205ENST00000580315 NAV1Q8NEY1 1877 aa29.8■■■□□ 2.36
CDC42EP4-205ENST00000580315 LOC285556D6RIA3 1793 aa29.8■■■□□ 2.36
CDC42EP4-205ENST00000580315 SHMT1P34896 483 aa29.79■■■□□ 2.36
CDC42EP4-205ENST00000580315 ABCB5Q2M3G0 1257 aa29.79■■■□□ 2.36
CDC42EP4-205ENST00000580315 EVI5LQ96CN4 794 aa29.79■■■□□ 2.36
CDC42EP4-205ENST00000580315 DOCK3Q8IZD9 2030 aa29.79■■■□□ 2.36
CDC42EP4-205ENST00000580315 DDX60LQ5H9U9 1706 aaKnown RBP29.79■■■□□ 2.36
CDC42EP4-205ENST00000580315 MYH7P12883 1935 aa29.79■■■□□ 2.36
CDC42EP4-205ENST00000580315 EVI5O60447 810 aa29.78■■■□□ 2.36
CDC42EP4-205ENST00000580315 CYP2D6P10635 497 aa29.78■■■□□ 2.36
CDC42EP4-205ENST00000580315 GNAT2P19087 354 aa29.78■■■□□ 2.36
CDC42EP4-205ENST00000580315 BACE1P56817 501 aa29.78■■■□□ 2.36
CDC42EP4-205ENST00000580315 GJD2Q9UKL4 321 aa29.78■■■□□ 2.36
CDC42EP4-205ENST00000580315 USP17L12C9JPN9 530 aa29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 USP17L21D6R901 530 aa29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 GPAA1O43292 621 aa29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 MTMR2Q13614 643 aa29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 SHROOM1Q2M3G4 852 aaPredicted RBP29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 TMOD4Q9NZQ9 345 aa29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 ARPP21Q9UBL0 812 aaPredicted RBP29.77■■■□□ 2.36
CDC42EP4-205ENST00000580315 C19orf81C9J6K1 198 aa29.76■■■□□ 2.35
CDC42EP4-205ENST00000580315 USP17L10C9JJH3 530 aa29.76■■■□□ 2.35
CDC42EP4-205ENST00000580315 RAB3GAP1Q15042 981 aa29.76■■■□□ 2.35
CDC42EP4-205ENST00000580315 C12orf60Q5U649 245 aa29.76■■■□□ 2.35
CDC42EP4-205ENST00000580315 GIMAP6Q6P9H5 292 aa29.76■■■□□ 2.35
CDC42EP4-205ENST00000580315 PAWRQ96IZ0 340 aaKnown RBP29.76■■■□□ 2.35
CDC42EP4-205ENST00000580315 ATAD5Q96QE3 1844 aa29.75■■■□□ 2.35
CDC42EP4-205ENST00000580315 M0R2C6 588 aa29.75■■■□□ 2.35
CDC42EP4-205ENST00000580315 HMGCRP04035 888 aa29.75■■■□□ 2.35
CDC42EP4-205ENST00000580315 MORF4L1Q9UBU8 362 aa29.75■■■□□ 2.35
CDC42EP4-205ENST00000580315 EVX2Q03828 476 aa29.74■■■□□ 2.35
CDC42EP4-205ENST00000580315 ZMYM1Q5SVZ6 1142 aa29.74■■■□□ 2.35
CDC42EP4-205ENST00000580315 CTR9Q6PD62 1173 aa29.74■■■□□ 2.35
CDC42EP4-205ENST00000580315 DYNLL2Q96FJ2 89 aa29.74■■■□□ 2.35
CDC42EP4-205ENST00000580315 GSG1L2A8MUP6 293 aa29.73■■■□□ 2.35
CDC42EP4-205ENST00000580315 MPHOSPH10O00566 681 aaKnown RBP29.73■■■□□ 2.35
CDC42EP4-205ENST00000580315 IRX3P78415 501 aaPredicted RBP29.73■■■□□ 2.35
CDC42EP4-205ENST00000580315 CYP2D7A0A087X1C5 515 aa29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 APPP05067 770 aa29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 HOXA7P31268 230 aaPredicted RBP29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 NECAB2Q7Z6G3 386 aa29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 TICAM2Q86XR7 235 aa29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 DIS3LQ8TF46 1054 aaKnown RBP29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 P2RX7Q99572 595 aaKnown RBP29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 FEZ1Q99689 392 aa29.72■■■□□ 2.35
CDC42EP4-205ENST00000580315 TRIM6-TRIM34B2RNG4 842 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 TDO2P48775 406 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 TRIM32Q13049 653 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 SBK1Q52WX2 424 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 USP17L2Q6R6M4 530 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 PLEKHM2Q8IWE5 1019 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 SLC44A5Q8NCS7 719 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 SEC62Q99442 399 aaKnown RBP29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 NACAP1Q9BZK3 213 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 RPTORQ8N122 1335 aa29.71■■■□□ 2.35
CDC42EP4-205ENST00000580315 PATL2C9JE40 543 aaKnown RBP29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 CDK8P49336 464 aa29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 USP14P54578 494 aa29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 C16orf86Q6ZW13 317 aa29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 ANKLE1Q8NAG6 615 aa29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 CCDC17Q96LX7 622 aa29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 OSBPL3Q9H4L5 887 aa29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 HMX1Q9NP08 348 aaPredicted RBP29.7■■■□□ 2.35
CDC42EP4-205ENST00000580315 PEX10O60683 326 aa29.69■■■□□ 2.34
CDC42EP4-205ENST00000580315 TMEM179Q6ZVK1 233 aa29.69■■■□□ 2.34
CDC42EP4-205ENST00000580315 TXNRD2Q9NNW7 524 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms