RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 IGF2BP3O00425 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
ERBB2-208ENST00000578630 RANBP6O60518 1105 aaKnown RBP13.66□□□□□ -0.22
ERBB2-208ENST00000578630 FGRP09769 529 aa13.66□□□□□ -0.22
ERBB2-208ENST00000578630 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
ERBB2-208ENST00000578630 TFAP4Q01664 338 aa13.66□□□□□ -0.22
ERBB2-208ENST00000578630 MAP4K1Q92918 833 aa13.66□□□□□ -0.22
ERBB2-208ENST00000578630 IL25Q9H293 177 aa13.66□□□□□ -0.22
ERBB2-208ENST00000578630 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
ERBB2-208ENST00000578630 NAV1Q8NEY1 1877 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 PDHXO00330 501 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 FOXN1O15353 648 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 ORC4O43929 436 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 OSBPP22059 807 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 HMGCS2P54868 508 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 ATP2B2Q01814 1243 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 PTH1RQ03431 593 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 ICA1Q05084 483 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 MTMR2Q13614 643 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 TAF1CQ15572 869 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-208ENST00000578630 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-208ENST00000578630 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
ERBB2-208ENST00000578630 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 NEDD1Q8NHV4 660 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 KIAA1683Q9H0B3 1180 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 ANO2Q9NQ90 1003 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 SLC45A1Q9Y2W3 748 aa13.65□□□□□ -0.22
ERBB2-208ENST00000578630 TBC1D8O95759 1140 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 TRDNQ13061 729 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 FAM47AQ5JRC9 791 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 STAG1Q8WVM7 1258 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 CFHR5Q9BXR6 569 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 NYAP2Q9P242 653 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 PNMA3Q9UL41 463 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 AGTPBP1Q9UPW5 1226 aa13.64□□□□□ -0.23
ERBB2-208ENST00000578630 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
ERBB2-208ENST00000578630 EIF5BO60841 1220 aaKnown RBP13.63□□□□□ -0.23
ERBB2-208ENST00000578630 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
ERBB2-208ENST00000578630 MOGSQ13724 837 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 CCDC178Q5BJE1 867 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 GPAT2Q6NUI2 795 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 ESR2Q92731 530 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 KRT23Q9C075 422 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 CNNM2Q9H8M5 875 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 MTMR4Q9NYA4 1195 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 TMX2Q9Y320 296 aa13.63□□□□□ -0.23
ERBB2-208ENST00000578630 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 TTLL1O95922 423 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 HSPA8P11142 646 aaKnown RBP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 HOXA7P31268 230 aaPredicted RBP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 LBX1P52954 281 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 SIAH1Q8IUQ4 282 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 LPAR1Q92633 364 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 MKL1Q969V6 931 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 C12orf42Q96LP6 360 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 PARK7Q99497 189 aaKnown RBP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 GOPCQ9HD26 462 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
ERBB2-208ENST00000578630 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
ERBB2-208ENST00000578630 IGKV6D-41A0A0C4DH26 115 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 A0A1W2PRG0 241 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 GPR25O00155 361 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 TLR2O60603 784 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 REC8O95072 547 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 CYP21A2P08686 494 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 IRX3P78415 501 aaPredicted RBP13.61□□□□□ -0.23
ERBB2-208ENST00000578630 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 CRHR2Q13324 411 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 CEP95Q96GE4 821 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 TTC14Q96N46 770 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 VCPKMTQ9H867 229 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 PRDM10Q9NQV6 1147 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 DDX60LQ5H9U9 1706 aaKnown RBP13.61□□□□□ -0.23
ERBB2-208ENST00000578630 DOCK1Q14185 1865 aa13.61□□□□□ -0.23
ERBB2-208ENST00000578630 RAD21O60216 631 aa13.6□□□□□ -0.23
ERBB2-208ENST00000578630 ARHGEF6Q15052 776 aa13.6□□□□□ -0.23
ERBB2-208ENST00000578630 TREML2Q5T2D2 321 aa13.6□□□□□ -0.23
ERBB2-208ENST00000578630 TBC1D10CQ8IV04 446 aa13.6□□□□□ -0.23
ERBB2-208ENST00000578630 SMCR8Q8TEV9 937 aaPredicted RBP13.6□□□□□ -0.23
ERBB2-208ENST00000578630 HOXC10Q9NYD6 342 aa13.6□□□□□ -0.23
ERBB2-208ENST00000578630 SYNPO2Q9UMS6 1093 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms